Sphingopyxis sp. YF1: EAO27_02080
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Entry
EAO27_02080 CDS
T10727
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf00020
Citrate cycle (TCA cycle)
spyf00190
Oxidative phosphorylation
spyf00650
Butanoate metabolism
spyf00720
Other carbon fixation pathways
spyf01100
Metabolic pathways
spyf01110
Biosynthesis of secondary metabolites
spyf01120
Microbial metabolism in diverse environments
spyf01200
Carbon metabolism
Module
spyf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spyf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spyf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EAO27_02080
00650 Butanoate metabolism
EAO27_02080
09102 Energy metabolism
00190 Oxidative phosphorylation
EAO27_02080
00720 Other carbon fixation pathways
EAO27_02080
Enzymes [BR:
spyf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
EAO27_02080
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
Motif
Other DBs
NCBI-ProteinID:
UNU41630
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Position
408497..410299
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AA seq
600 aa
AA seq
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MTDAYKIIDHVYDTVVVGAGGSGLRATMGSAEAGLKTACITKVFPTRSHTVAAQGGIAAS
LGNNSPDHWQWHMYDTVKGSDWLGDQDAIEYMVREAPAAVYELEHAGVPFSRNQDGTIYQ
RPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFFIEYFALDLIMENGE
CRGVIALCMEDGSIHRFRSQAVVLATGGYGRCYFTATSAHTCTGDGGGMVLRAGLPLQDM
EFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMALE
IREGRGVGPHNDHIYLHLDHIDPAVLAERLPGITESGKIFAGVDLTRQPLPVVPTVHYNM
GGIPCNYHGEVVTLRDGNPDAVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGH
RLKELLKPGAAQPALPKDSADLALARLDHFRNASGGSPTAEIRTEMQRAMSQHAAVFRTD
ELMAEGKEKLAKTYQRMNDVHVTDRSLIWNTDLVETLELDNLIAQATVTMHSAYNRKESR
GAHAHEDFPNRDDATWMKHTISWFDGWGGKGGGVRLDYRPVHEYTLSDDVDYIKPKARVY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcctacaagatcatcgaccatgtgtacgacaccgtcgtcgtcggcgccggc
ggctcgggtctgcgcgccacgatgggcagcgccgaagcgggactcaagaccgcctgcatc
accaaggtgttcccgacgcgcagccacaccgtcgcggcgcagggcggcatcgccgcgagc
ctcggcaacaattcgcccgaccactggcagtggcacatgtacgacacggtcaaggggtcc
gactggctcggcgaccaggacgcgatcgaatatatggtgcgcgaggcgcccgccgcggtc
tacgaactcgagcacgccggcgtgccgttcagccgcaaccaggacggcaccatctaccag
cgcccgttcggcggtcatatgcagaatatgggcgaaggcccgccggtgcagcgcacctgc
gctgcggctgaccgcaccggccacgcgatgctccacgcgctctatcagcagtcgctgaaa
tatgacgcggacttcttcatcgaatatttcgcgctcgacctgatcatggaaaatggcgag
tgccgcggcgtgatcgccctgtgcatggaggatggcagcatccaccgcttccgcagccag
gccgtcgtgctcgcgacgggcggctacggtcgctgctatttcaccgcgacctcggcgcac
acctgcaccggcgacggcggcggcatggtgctgcgcgccgggctgcccctgcaggacatg
gaattcgtccagttccacccgaccggcatctacggcgcgggcgtgctgatcaccgaaggc
gcgcgcggcgagggcggttacctcaccaacagcgagggcgagcggttcatggaacgctat
gccccgtcggcgaaggatctcgcgtcgcgcgacgtggtgtcgcgctcgatggcgctcgaa
atccgcgaaggccgcggcgtcggcccgcacaacgaccatatctacctccacctcgaccat
atcgatcccgcggtgcttgccgagcgcctgccgggcatcaccgagagcggaaagattttc
gcgggcgtcgacctgacgcgccagccgctgccggtcgtcccgacggtccattacaatatg
ggcggcattccctgtaactatcatggcgaagtcgtcacgctgcgcgacggcaatcccgat
gcggtcgtccccggcctgttcgcggtcggcgaagccgcgtgcgtttcggtccatggcgcg
aaccgtctgggctcgaacagcctgatcgacctcgtggtgttcggccgcgcgaccggtcat
cgcctcaaggaactgctcaagcccggcgccgcccagcccgcgctgcccaaggacagcgcc
gacctcgcgctcgcgcgtctcgaccatttccgcaacgccagcggcggttcgcccaccgcg
gaaatccgcaccgagatgcagcgcgccatgtcgcagcacgcggcggtgttccgcaccgac
gagctgatggccgaaggcaaggaaaagctcgccaagacctatcagcggatgaacgacgtc
cacgtcaccgaccgcagcctgatctggaacaccgatctcgtcgaaacgctcgagctcgac
aatctgatcgcgcaggcgacggtgacgatgcattcggcgtacaaccgcaaggaaagccgc
ggcgcccacgcgcacgaggatttccccaaccgcgacgacgcgacgtggatgaagcacacg
atcagctggttcgacggctggggcggcaagggcggcggcgttcgcctcgattatcgtccg
gtccacgaatatacgctttcggacgacgtcgattatatcaagcccaaggcgcgcgtttac
tga
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