Sphingopyxis sp. YF1: EAO27_02285
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Entry
EAO27_02285 CDS
T10727
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf00010
Glycolysis / Gluconeogenesis
spyf00020
Citrate cycle (TCA cycle)
spyf00260
Glycine, serine and threonine metabolism
spyf00280
Valine, leucine and isoleucine degradation
spyf00310
Lysine degradation
spyf00380
Tryptophan metabolism
spyf00620
Pyruvate metabolism
spyf00630
Glyoxylate and dicarboxylate metabolism
spyf00640
Propanoate metabolism
spyf00670
One carbon pool by folate
spyf00785
Lipoic acid metabolism
spyf01100
Metabolic pathways
spyf01110
Biosynthesis of secondary metabolites
spyf01120
Microbial metabolism in diverse environments
spyf01200
Carbon metabolism
spyf01210
2-Oxocarboxylic acid metabolism
spyf01240
Biosynthesis of cofactors
Module
spyf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spyf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spyf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
spyf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
EAO27_02285 (lpdA)
00020 Citrate cycle (TCA cycle)
EAO27_02285 (lpdA)
00620 Pyruvate metabolism
EAO27_02285 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
EAO27_02285 (lpdA)
00640 Propanoate metabolism
EAO27_02285 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EAO27_02285 (lpdA)
00280 Valine, leucine and isoleucine degradation
EAO27_02285 (lpdA)
00310 Lysine degradation
EAO27_02285 (lpdA)
00380 Tryptophan metabolism
EAO27_02285 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EAO27_02285 (lpdA)
00670 One carbon pool by folate
EAO27_02285 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spyf04147
]
EAO27_02285 (lpdA)
Enzymes [BR:
spyf01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
EAO27_02285 (lpdA)
Exosome [BR:
spyf04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
EAO27_02285 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
HI0933_like
FAD_binding_3
GIDA
AlaDh_PNT_C
NAD_binding_8
Lys_Orn_oxgnase
Thi4
3HCDH_N
DUF7759
Dicer_PBD
DAO
Motif
Other DBs
NCBI-ProteinID:
UNU41666
LinkDB
All DBs
Position
448063..449460
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AA seq
465 aa
AA seq
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MADYDYDVLVIGAGPGGYVAAIRAAQLGLKTACAEGRETLGGTCLNVGCIPSKALLHASE
FYEAAAGGAMAAMGIKVKPELDLPTMQGQRKDAVKGLTGGIEFLFKKNKVDWLKGYAQFT
SADTVEVAGKEVRAKNIIIATGSSVTPLPGVEVDNDKQIIVDSTGALELAKVPGHMVVIG
GGVIGLELGSVWRRLGAKVTCVEFLDQILPGMDGDVRKEANRIFKKQGVEFKLKTKVTKA
EVKGKKAVLTLEPAAGGDAETLEADVVLVSIGRRPNTDGLGLDKAGLTVNQRGQIETDHD
FRTSVPGIWAIGDVVPGPMLAHKAEDEGIACAENIAGQTGIVNHDVIPSVVYTMPEIAGV
GLTEEQAKERGEVKVGKFPMMANSRAKTNHEPDGFVKVIADAKTDRVLGVWCIASVAGTM
IAQAAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacgactacgacgtgcttgtcatcggtgccggccccggcggttatgtcgcg
gcgatccgcgcggcacagctgggcctcaagaccgcctgcgccgaagggcgcgagacgctg
ggcggcacctgcctcaacgtcggctgcatcccgtcgaaggcgctgctccacgcgtcggaa
ttttacgaagccgccgccggtggcgcgatggcggcgatgggcatcaaggtgaagcccgag
ctcgacctgccgacgatgcagggccagcgcaaggatgcggtcaagggcctgaccggcgga
atcgaattcttgttcaagaagaacaaggtcgactggctcaagggctatgcgcagttcaca
tcggccgacacggtcgaagtcgcgggcaaggaggtgcgcgcgaaaaatatcatcatcgcc
accggctcgtcggtgaccccgctgcccggcgtcgaggtcgacaatgacaagcagatcatc
gtcgattcgaccggcgcgctcgaacttgccaaggtcccaggccatatggtcgtcatcggc
ggcggcgtgatcgggctcgaactcggcagcgtgtggcgccgcctcggtgccaaggtcacc
tgcgtcgaattcctcgaccagattcttcccggcatggacggcgacgtccgcaaggaagcg
aacaggatcttcaagaagcagggtgtcgaattcaagctcaagaccaaggtgacgaaggcc
gaggttaagggcaagaaggcggtgctgacgctcgaacccgccgcgggcggcgacgccgaa
acgctcgaggccgatgtcgtgctcgtgtcgatcgggcgccggccgaacaccgacggcctc
ggcctcgacaaggccgggctgaccgtcaaccagcgcggtcagatcgagaccgatcatgat
ttccgcacctcggttcccggcatctgggcgatcggcgacgtggtcccgggcccgatgctc
gcgcacaaggccgaggatgaaggcatcgcctgcgccgagaatattgcgggtcagaccggc
atcgtgaaccacgatgtcatcccgtcggtcgtctataccatgcccgaaatcgccggtgtc
ggcctgaccgaagagcaggcgaaggaacgcggcgaggtcaaggtcggcaaattcccgatg
atggcgaacagccgtgcgaagaccaatcacgaacccgacggttttgtgaaggtcatcgcg
gatgcgaagaccgatcgcgtgctgggcgtgtggtgcatcgcgagcgtcgcgggcacgatg
atcgcacaggcggcgcaggcgatggaattcggcgcgacgtccgaagacatcgcctacacc
tgccacgcgcatccgacgcacagcgaggcgatcaaggaagccgcgatggcggtcaccggc
aagccgatccacatctga
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