KEGG   Sphingopyxis sp. YF1: EAO27_02285
Entry
EAO27_02285       CDS       T10727                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
spyf  Sphingopyxis sp. YF1
Pathway
spyf00010  Glycolysis / Gluconeogenesis
spyf00020  Citrate cycle (TCA cycle)
spyf00260  Glycine, serine and threonine metabolism
spyf00280  Valine, leucine and isoleucine degradation
spyf00310  Lysine degradation
spyf00380  Tryptophan metabolism
spyf00620  Pyruvate metabolism
spyf00630  Glyoxylate and dicarboxylate metabolism
spyf00640  Propanoate metabolism
spyf00670  One carbon pool by folate
spyf00785  Lipoic acid metabolism
spyf01100  Metabolic pathways
spyf01110  Biosynthesis of secondary metabolites
spyf01120  Microbial metabolism in diverse environments
spyf01200  Carbon metabolism
spyf01210  2-Oxocarboxylic acid metabolism
spyf01240  Biosynthesis of cofactors
Module
spyf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
spyf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spyf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
spyf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:spyf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    EAO27_02285 (lpdA)
   00020 Citrate cycle (TCA cycle)
    EAO27_02285 (lpdA)
   00620 Pyruvate metabolism
    EAO27_02285 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    EAO27_02285 (lpdA)
   00640 Propanoate metabolism
    EAO27_02285 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EAO27_02285 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    EAO27_02285 (lpdA)
   00310 Lysine degradation
    EAO27_02285 (lpdA)
   00380 Tryptophan metabolism
    EAO27_02285 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    EAO27_02285 (lpdA)
   00670 One carbon pool by folate
    EAO27_02285 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spyf04147]
    EAO27_02285 (lpdA)
Enzymes [BR:spyf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     EAO27_02285 (lpdA)
Exosome [BR:spyf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   EAO27_02285 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 HI0933_like FAD_binding_3 GIDA AlaDh_PNT_C NAD_binding_8 Lys_Orn_oxgnase Thi4 3HCDH_N DUF7759 Dicer_PBD DAO
Other DBs
NCBI-ProteinID: UNU41666
LinkDB
Position
448063..449460
AA seq 465 aa
MADYDYDVLVIGAGPGGYVAAIRAAQLGLKTACAEGRETLGGTCLNVGCIPSKALLHASE
FYEAAAGGAMAAMGIKVKPELDLPTMQGQRKDAVKGLTGGIEFLFKKNKVDWLKGYAQFT
SADTVEVAGKEVRAKNIIIATGSSVTPLPGVEVDNDKQIIVDSTGALELAKVPGHMVVIG
GGVIGLELGSVWRRLGAKVTCVEFLDQILPGMDGDVRKEANRIFKKQGVEFKLKTKVTKA
EVKGKKAVLTLEPAAGGDAETLEADVVLVSIGRRPNTDGLGLDKAGLTVNQRGQIETDHD
FRTSVPGIWAIGDVVPGPMLAHKAEDEGIACAENIAGQTGIVNHDVIPSVVYTMPEIAGV
GLTEEQAKERGEVKVGKFPMMANSRAKTNHEPDGFVKVIADAKTDRVLGVWCIASVAGTM
IAQAAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggctgactacgactacgacgtgcttgtcatcggtgccggccccggcggttatgtcgcg
gcgatccgcgcggcacagctgggcctcaagaccgcctgcgccgaagggcgcgagacgctg
ggcggcacctgcctcaacgtcggctgcatcccgtcgaaggcgctgctccacgcgtcggaa
ttttacgaagccgccgccggtggcgcgatggcggcgatgggcatcaaggtgaagcccgag
ctcgacctgccgacgatgcagggccagcgcaaggatgcggtcaagggcctgaccggcgga
atcgaattcttgttcaagaagaacaaggtcgactggctcaagggctatgcgcagttcaca
tcggccgacacggtcgaagtcgcgggcaaggaggtgcgcgcgaaaaatatcatcatcgcc
accggctcgtcggtgaccccgctgcccggcgtcgaggtcgacaatgacaagcagatcatc
gtcgattcgaccggcgcgctcgaacttgccaaggtcccaggccatatggtcgtcatcggc
ggcggcgtgatcgggctcgaactcggcagcgtgtggcgccgcctcggtgccaaggtcacc
tgcgtcgaattcctcgaccagattcttcccggcatggacggcgacgtccgcaaggaagcg
aacaggatcttcaagaagcagggtgtcgaattcaagctcaagaccaaggtgacgaaggcc
gaggttaagggcaagaaggcggtgctgacgctcgaacccgccgcgggcggcgacgccgaa
acgctcgaggccgatgtcgtgctcgtgtcgatcgggcgccggccgaacaccgacggcctc
ggcctcgacaaggccgggctgaccgtcaaccagcgcggtcagatcgagaccgatcatgat
ttccgcacctcggttcccggcatctgggcgatcggcgacgtggtcccgggcccgatgctc
gcgcacaaggccgaggatgaaggcatcgcctgcgccgagaatattgcgggtcagaccggc
atcgtgaaccacgatgtcatcccgtcggtcgtctataccatgcccgaaatcgccggtgtc
ggcctgaccgaagagcaggcgaaggaacgcggcgaggtcaaggtcggcaaattcccgatg
atggcgaacagccgtgcgaagaccaatcacgaacccgacggttttgtgaaggtcatcgcg
gatgcgaagaccgatcgcgtgctgggcgtgtggtgcatcgcgagcgtcgcgggcacgatg
atcgcacaggcggcgcaggcgatggaattcggcgcgacgtccgaagacatcgcctacacc
tgccacgcgcatccgacgcacagcgaggcgatcaaggaagccgcgatggcggtcaccggc
aagccgatccacatctga

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