Sphingopyxis sp. YF1: EAO27_02940
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Entry
EAO27_02940 CDS
T10727
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf00300
Lysine biosynthesis
spyf00470
D-Amino acid metabolism
spyf01100
Metabolic pathways
spyf01110
Biosynthesis of secondary metabolites
spyf01120
Microbial metabolism in diverse environments
spyf01230
Biosynthesis of amino acids
Module
spyf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EAO27_02940 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EAO27_02940 (lysA)
Enzymes [BR:
spyf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EAO27_02940 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UNU41781
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Position
601065..602324
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AA seq
419 aa
AA seq
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MNHFDLRDGVMHAEDIPLPRIAEEIGTPVYVYSRATLERHAQAFRDGLKDVPKKHLAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERALAAGMAAEDIVFSGVGKTRAELALGLDRGI
GQFNIEHEPEGVALAEIALAREMTAPAVLRVNPDVDAGTHAKISTGKAENKFGVGIDVAP
EIFARLSALPGLNMRGVAVHIGSQLTSLAPLEAAFERVGRLVADLRAAGHSITHVDLGGG
LGVPYKDGDNPPSPAEYGAMVARVTRDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGVTH
PFVIVDAAMNDLARPALYDAYHDFVAVKPSGEQMTASIVGPVCETGDTFARDRVTDKVEP
GDLAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYAVVADRIAAGTIMAAERVPDWID
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatttcgaccttcgtgacggcgtgatgcacgccgaagatattccgctgccgcgt
atcgccgaggaaatcggcacccccgtctacgtctattcgcgcgcgacgctcgaacgccat
gcgcaggcgtttcgcgacgggctgaaggatgtgccgaagaagcacctcgccttcgcgatc
aagtgcaaccccaacctcggcgtgctgcgcgtgctggcgcggcaggggtacggcgccgac
gtcgtctcgggcggcgagctcgaacgcgcgctcgcggcgggcatggccgccgaagacatc
gtcttttcgggcgtcggcaagacgcgcgccgagctggcgctcggcctcgaccgcggcatc
ggccagttcaacatcgagcatgagcccgaaggggtggcgctcgccgaaattgcgctcgcc
agggaaatgaccgcgccggcggtgctgcgcgtcaatcccgatgtcgatgccggaacccat
gccaagatctcgaccggcaaggctgagaacaagttcggcgtcggcatcgacgtcgcgccc
gaaatcttcgcccgcctgtcggcgctgcccgggctcaacatgcgcggcgtcgcggtccat
atcggcagccagctcaccagcctcgccccgctcgaggcggcgttcgagcgcgtcggccgg
ctcgtcgccgacctgcgcgccgccgggcacagcatcacccatgtcgacctcggcggcggc
ctcggcgtgccgtacaaggatggcgacaacccgccgagcccggccgaatatggcgcgatg
gtcgcgcgcgtgacccgcgactgggacgtgacgctgatgttcgaacccggccgcgtcatc
gcgggcaacaccggcgtgctgctgaccgaggtgctgtgggtcaagcccggcgtgacgcat
cccttcgtgatcgtcgatgccgcgatgaacgacctcgcgcgccccgcgctttacgacgcc
taccatgatttcgtcgcggtgaagccgtcgggcgagcagatgaccgcgtcgatcgtcggc
ccggtatgcgagaccggcgacaccttcgcgcgcgaccgcgtgaccgacaaggtcgagccg
ggtgatctcgcggtgttccggaccgcgggcgcctatggcgcgacgatggcgtcgacctac
aacagccgcagcctcgtccccgaggtgctcgtcgacggcgaccgctatgccgtcgtcgcc
gaccggatcgccgcgggcacgatcatggccgccgagcgcgtgcccgactggatcgactga
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