KEGG   Sphingopyxis sp. YF1: EAO27_02940
Entry
EAO27_02940       CDS       T10727                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
spyf  Sphingopyxis sp. YF1
Pathway
spyf00300  Lysine biosynthesis
spyf00470  D-Amino acid metabolism
spyf01100  Metabolic pathways
spyf01110  Biosynthesis of secondary metabolites
spyf01120  Microbial metabolism in diverse environments
spyf01230  Biosynthesis of amino acids
Module
spyf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:spyf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    EAO27_02940 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    EAO27_02940 (lysA)
Enzymes [BR:spyf01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     EAO27_02940 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: UNU41781
LinkDB
Position
601065..602324
AA seq 419 aa
MNHFDLRDGVMHAEDIPLPRIAEEIGTPVYVYSRATLERHAQAFRDGLKDVPKKHLAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERALAAGMAAEDIVFSGVGKTRAELALGLDRGI
GQFNIEHEPEGVALAEIALAREMTAPAVLRVNPDVDAGTHAKISTGKAENKFGVGIDVAP
EIFARLSALPGLNMRGVAVHIGSQLTSLAPLEAAFERVGRLVADLRAAGHSITHVDLGGG
LGVPYKDGDNPPSPAEYGAMVARVTRDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGVTH
PFVIVDAAMNDLARPALYDAYHDFVAVKPSGEQMTASIVGPVCETGDTFARDRVTDKVEP
GDLAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYAVVADRIAAGTIMAAERVPDWID
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaaccatttcgaccttcgtgacggcgtgatgcacgccgaagatattccgctgccgcgt
atcgccgaggaaatcggcacccccgtctacgtctattcgcgcgcgacgctcgaacgccat
gcgcaggcgtttcgcgacgggctgaaggatgtgccgaagaagcacctcgccttcgcgatc
aagtgcaaccccaacctcggcgtgctgcgcgtgctggcgcggcaggggtacggcgccgac
gtcgtctcgggcggcgagctcgaacgcgcgctcgcggcgggcatggccgccgaagacatc
gtcttttcgggcgtcggcaagacgcgcgccgagctggcgctcggcctcgaccgcggcatc
ggccagttcaacatcgagcatgagcccgaaggggtggcgctcgccgaaattgcgctcgcc
agggaaatgaccgcgccggcggtgctgcgcgtcaatcccgatgtcgatgccggaacccat
gccaagatctcgaccggcaaggctgagaacaagttcggcgtcggcatcgacgtcgcgccc
gaaatcttcgcccgcctgtcggcgctgcccgggctcaacatgcgcggcgtcgcggtccat
atcggcagccagctcaccagcctcgccccgctcgaggcggcgttcgagcgcgtcggccgg
ctcgtcgccgacctgcgcgccgccgggcacagcatcacccatgtcgacctcggcggcggc
ctcggcgtgccgtacaaggatggcgacaacccgccgagcccggccgaatatggcgcgatg
gtcgcgcgcgtgacccgcgactgggacgtgacgctgatgttcgaacccggccgcgtcatc
gcgggcaacaccggcgtgctgctgaccgaggtgctgtgggtcaagcccggcgtgacgcat
cccttcgtgatcgtcgatgccgcgatgaacgacctcgcgcgccccgcgctttacgacgcc
taccatgatttcgtcgcggtgaagccgtcgggcgagcagatgaccgcgtcgatcgtcggc
ccggtatgcgagaccggcgacaccttcgcgcgcgaccgcgtgaccgacaaggtcgagccg
ggtgatctcgcggtgttccggaccgcgggcgcctatggcgcgacgatggcgtcgacctac
aacagccgcagcctcgtccccgaggtgctcgtcgacggcgaccgctatgccgtcgtcgcc
gaccggatcgccgcgggcacgatcatggccgccgagcgcgtgcccgactggatcgactga

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