Sphingopyxis sp. YF1: EAO27_03855
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Entry
EAO27_03855 CDS
T10727
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf00470
D-Amino acid metabolism
spyf00550
Peptidoglycan biosynthesis
spyf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EAO27_03855 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EAO27_03855 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spyf01011
]
EAO27_03855 (murD)
Enzymes [BR:
spyf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
EAO27_03855 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
spyf01011
]
Precursor biosynthesis
Amino acid ligase
EAO27_03855 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
UNU41939
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Position
803937..805253
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AA seq
438 aa
AA seq
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MITSRAFAGRRYAVLGLARSGLAAVEALIASGAGVTAWDDREAARDEAMALGADIGNPLE
IDLIGFAGVVVSPGVPLNRHPIAAHARAAHVPVIGDVELFAEAAADLPPHRIVGITGTNG
KSTVTALVTHMLESAGVPALMGGNIGLPILSRDPLAPNENGTGVYVLELSSYQLDLAHSL
ACDVAVLTNISPDHLDRYDGFAGYTASKARLFSLQHQGQVAIVAVDDDPSKMIASRINHR
LHRVSAKDVDPADQMRWPALQGPHNAQNAVCAIAVCRVLGLNDEAIERGLATYKSLPHRM
ELVGEVAGVRWFNDSKATNAASAAPALAAFPPAPDQRLHWIAGGQAKGDGLAACRPWFCH
VKAAYLIGEAMEGFAAEIGDAIPVDRSGDLATAVARAAAAAAPGDIVLLSPACASFDQFK
DYEERGDRFRAIVRAFGA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacgtcgcgcgcctttgccggccgccgctacgcggtgctggggctggcgcgctcg
gggctcgcggcggtcgaggcgctgatcgccagcggcgcgggggtcaccgcgtgggacgac
cgcgaggccgcgcgcgacgaggcgatggcgctcggcgccgacatcggcaatccgctcgag
atcgacctgatcggttttgcgggcgtcgtcgtgtcgcccggcgtaccgctcaaccgtcac
ccgatcgccgcgcacgcgcgcgcggcgcatgtcccggtgatcggcgacgtcgagctgttc
gccgaggcggccgccgacctgccgccgcaccgcatcgtcggcatcaccggcaccaacggc
aagtcgacggtgaccgcgctcgtcacccacatgctcgaaagcgcgggggtgcccgcgctg
atgggcggcaatatcggcctgccgatcctgtcgcgcgatccgctcgcccccaatgaaaac
ggcaccggggtctatgtcctcgaactgtcgagctaccagctcgacctcgcgcacagcctc
gcgtgcgacgtcgcggtgctcaccaacatttcgcccgaccatctcgaccgctacgacggt
ttcgcgggctacaccgcgtcgaaggcgcgattgttcagcctccagcaccagggtcaggtc
gcgatcgtcgcggtcgacgatgatccgtcgaagatgatcgcgagccgcatcaaccaccgt
ctccaccgcgtctcggcaaaggacgtcgaccccgccgaccagatgcgctggcccgcattg
caggggccgcacaacgcccagaacgcggtctgcgcgatcgcggtgtgccgcgtgctgggt
ttgaacgacgaagcgatcgagcgcggcctcgcgacgtacaaatcgctgccgcatcgcatg
gaattggtcggcgaagtcgctggcgtccgctggttcaatgacagcaaggcgaccaacgcg
gcttccgctgcaccggcgctggcggcctttccgccggcgccggaccagcgtctccactgg
attgcgggcgggcaggccaagggcgacgggctcgcggcgtgccggccgtggttctgccac
gtcaaggcggcctatctgatcggcgaggcgatggagggctttgccgccgaaatcggcgac
gcgatcccggtcgaccgctcgggcgacctcgcgaccgcggtcgcgcgcgccgccgccgcc
gccgcgccgggcgatatcgtgctgctgtcgccggcctgcgcctcgttcgaccagttcaag
gattatgaggagcgcggcgaccgcttccgcgcgatcgtcagggcattcggggcatga
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