KEGG   Sphingopyxis sp. YF1: EAO27_06560
Entry
EAO27_06560       CDS       T10727                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
spyf  Sphingopyxis sp. YF1
Pathway
spyf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spyf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EAO27_06560 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spyf03400]
    EAO27_06560 (uvrA)
DNA repair and recombination proteins [BR:spyf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EAO27_06560 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EAO27_06560 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND1 AAA_29 DnaJ_CXXCXGXG AAA_25 AAA_21 TylF CA109-like
Other DBs
NCBI-ProteinID: UNU42411
LinkDB
Position
complement(1367025..1369925)
AA seq 966 aa
MSLTHISVRGAREHNLKGIDVDLPRDALVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGIP
YSPATGEPISAQTVSQMVDRVMELPEGTRAYLLAPVVRGRKGEYKKELAQWQKDGFTRVR
IDGEFYEIGDAPTLDKKYKHDIEVVVDRIAVREGLETRLADSFETALKLAEGLAYVDLAD
GPVPGREEEDTGGAMKGAGIPANRLIFSEKFACPVSGFTIAEIEPRLFSFNAPQGACPAC
DGLGERQEFDPDLVVPNHALSLKKGAVVPWAKSNPPSPYYMQVLESLGKAYGFDMTTPWQ
DLPGEVQLIILYGTGGKPVELTFKDGKRSYTTMKAFEGVIGNLGRRMLQTESAWMREELS
KYQTPQPCETCHGARLRPEPLAVKIAGENISMSAQRSVADALRWFAGLDEKLNDTQRQIA
KAILKEINERLGFLNNVGLDYLNLNRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPS
IGLHQRDNDRLLATLKRLRDLGNTVIVVEHDEDAIRHADYVVDMGPGAGLHGGEIVAQGT
LDEVLANKKSLTAAYLTGAKRIEVPGHRRKGNGFDLVLKGARANNLNNVTATIPLGTFTC
VTGLSGSGKSSLIIDTLYASAARVLNGARMVAGPHDSLSGLEHCDKVIDIDQSPIGRTPR
SNPATYTGAFTIIRDWFAGLPESQARGYKPGRFSFNVKGGRCETCTGDGLIKIEMHFLPD
VYVTCETCHGKRYNRETLEVKFKGHSIADVLDMTVEDAADFFKAVPAIRDKMAMLVRVGL
GYIKVGQQATTLSGGEAQRVKLAKELSRRSTGQTLYILDEPTTGLHFEDVRKLLEVLQAL
VDQGNSVVVIEHNLDVIKTADYILDLGPEGGVKGGEIVAAGTPEEVVKEKRSFTGQYLAP
LLAAVK
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgagtctcacccacatctccgtgcgcggcgcgcgcgagcataatctgaagggcatcgac
gtcgacctgccgcgcgatgcgctcgtcgtcatcaccggtctcagcggcagcggcaagtcg
agcctcgccttcgacaccatctatgccgaggggcagcggcgctatgtggagtcgctctcc
gcttacgcgcgccagttcctcgagatgatgcagaagcccgacgtcgagcatatcgacggg
ctgtcgccggcgatcagcatcgagcagaagacgacgagccgcaacccgcgctcgaccgtc
gcgacggtcactgagatctacgactatatgcgcctcttgtgggcgcgcgtcggcattcct
tactctcccgccaccggcgagccgatcagcgcgcagacggtcagccagatggtcgaccgc
gtgatggaattgcccgagggcacgcgcgcctatctgctcgctcccgtcgtgcgcgggcgc
aagggcgagtataagaaggaactcgcgcagtggcagaaggacggcttcacgcgcgtccgc
atcgacggcgaattttacgagatcggcgacgcgccgacgctcgacaagaaatacaagcat
gacatcgaggtcgtcgtcgaccgtatcgcggtgcgtgagggtctcgaaacacggctcgcc
gacagcttcgagaccgcgctgaagctcgccgaggggctcgcctatgtcgacctcgccgac
ggccccgtgccggggcgcgaggaggaggacaccggcggcgcgatgaagggcgcgggcatc
cctgcgaaccggctgatcttctccgaaaaattcgcctgccccgtgtcgggcttcacgatc
gccgagatcgaaccgcggctgttcagtttcaacgcgccgcagggcgcgtgccccgcgtgc
gacgggctcggcgagcggcaggagttcgaccccgacctcgtcgtccccaaccatgcgctg
agcctgaaaaagggcgcggtggtgccgtgggcgaaatcgaacccgccctcgccttactat
atgcaggtgctcgaaagcctcggcaaagcctatggtttcgacatgaccacgccgtggcag
gacctgcccggcgaggtgcagctgatcatcctctacggcaccggcggcaagcccgtcgaa
ctgaccttcaaggacggcaagcgcagctacacgacgatgaaggcattcgagggcgtgatc
ggcaacttgggccgccggatgctgcagaccgagagcgcgtggatgcgcgaggagctgtcg
aaataccagacgccgcagccgtgcgagacgtgccacggcgcgcggctgcgccccgaaccg
ctcgcggtcaagatcgcgggcgagaacatcagcatgtcggcgcagcgcagcgtcgccgac
gcgctccgctggttcgccggcctcgacgaaaagctcaacgacacgcagcgccagatcgcc
aaggcgatcctgaaagagatcaacgagcggctcggctttctcaacaatgtcggactcgac
tacctcaacctcaaccgcaccagcggcacactcagcggtggcgagagccagcgcattcgc
ctcgccagccagatcggcagcgggctgtcgggggtgctctacgtcctcgacgaaccgagc
atcgggctccaccagcgcgacaacgaccggctgctcgcgacgctgaagcggctccgcgac
ctcggcaacacggtgatcgtcgtcgagcatgacgaggatgcgatccgccacgccgactat
gtcgtcgacatgggccccggcgcggggctgcacggcggcgagatcgtcgcgcagggcacg
ctcgacgaggtgctcgcgaacaagaagagcctgaccgcggcgtacctcaccggtgcgaag
cggatcgaggtgccggggcaccggcgcaagggcaatggcttcgacctcgtgctcaagggc
gcgcgcgcgaacaacctcaacaatgtcaccgcgacgatcccgctcggcaccttcacctgc
gtcaccggcctgtcgggatcgggcaagtcgagcctgatcatcgatacgctctacgccagc
gcggcgcgcgtgctcaacggcgcgcggatggtcgcggggccgcacgacagcctgtcgggg
ctcgaacattgcgacaaggtcattgacatcgaccagtcgccgatcggccgcaccccgcgc
tcgaaccccgcgacctacaccggcgccttcacgatcatccgcgactggttcgcggggctg
cccgaaagccaggcgcgcgggtacaagcccgggcgcttcagcttcaacgtcaagggcggg
cgctgcgagacctgcaccggcgacgggctgatcaagatcgagatgcacttcctgcccgac
gtctatgtgacgtgcgagacgtgccacggcaaacgctacaaccgcgagacgctcgaggtg
aagttcaaggggcacagcatcgccgacgtgctcgacatgacggtcgaggacgccgcggac
ttcttcaaggcggtgcccgcgatccgcgacaagatggcgatgctcgtccgcgtggggctc
ggctatatcaaggtcgggcagcaggcgacgacgctgtcggggggcgaggcgcagcgggtg
aagctcgccaaggaactcagccgccgctcgaccggacagacgctctacatcctcgacgag
ccgaccaccggcctccatttcgaggatgtcaggaagctgctcgaagtgctccaggcgctc
gtcgaccagggcaacagcgtcgtggtgatcgagcataatctggatgtcatcaagaccgcc
gattacatcctcgacctcggccccgaaggcggggtcaagggcggcgagatcgtcgccgcg
gggacgcccgaagaggtggtcaaggaaaagcgcagcttcaccgggcaatatctggcaccg
ctgctggcggcagtgaaatag

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