Sphingopyxis sp. YF1: EAO27_08390
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Entry
EAO27_08390 CDS
T10727
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spyf Sphingopyxis sp. YF1
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spyf03032
]
EAO27_08390 (gyrA)
03400 DNA repair and recombination proteins [BR:
spyf03400
]
EAO27_08390 (gyrA)
Enzymes [BR:
spyf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EAO27_08390 (gyrA)
DNA replication proteins [BR:
spyf03032
]
Prokaryotic type
DNA Topoisomerases
EAO27_08390 (gyrA)
DNA repair and recombination proteins [BR:
spyf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAO27_08390 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2835
Motif
Other DBs
NCBI-ProteinID:
UNU42722
LinkDB
All DBs
Position
1762271..1765015
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AA seq
914 aa
AA seq
DB search
MTEENTPMEPPSDGISSINIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSAY
ESGYVASKPYRKSARIVGDVMGKYHPHGDSSIYDALARMTQDWSMSVPLIDGQGNFGSMD
PDPPAAMRYTESRLAKVAITLLDDLDKDTVDFQPNYDGSESEPTVLPARYPNLLVNGAGG
IAVGMATNIPPHNLGEVITATLATMANPAITLEELMGIVPGPDFPTGAMILGQGGARNAY
ATGRGSIMMRSTHTIEEGRGDRRSIVLTSIPFQVGKSGLVEKIAEAARDKRIEGVADIRD
ESNREGVRVVIDLKRDATPDVVLNQLWRHTPAQSSFPANMLAIRGGRPEMMGLKTILEAF
ITFREDVITRRCKYELAKARDRAHILLGLVVAVSNLDEVVRIIRGSSSPAMAREALLVRE
WPIGEIAPYIRLVEAIEGEAENATTYRLSEIQVKAILDLRLHRLTALGRDEIGNELKELA
SEIEELLSILADRDKLYAVMREELEAVRDEFAKPRRTLVAPAADGIDDEDLIEREEMVVT
VTLDGYIKRTPLETFRAQRRGGKGRAGMATKDEDVVTNLFVTSTHTPVLFFSTAGKVYRM
KVWRLPEGGPATRGRPMINLLPLATGETISTVLPLPENEDEWGKLHVMFATAKGSVRRNS
MDAFTNVPSNGKIAMKFEGEDEDDRLIGVALLDESDDVLLATRQGKAIRFPGEDVREFQS
RNSTGVRGMRLGAGDEVISLSILHKAGIRDQEEREDYLRHAPWKAEKDSDPQMEAARFDE
LRTKEQFILTVCANGYGKLSSAYEYRRTGRGGQGITNIDNIGRNGPVVASFPATQAHQLM
LVTDQAKLIRMGLDSLRVIGRGSAGVRLFDVAKDEHVVSAALIEEGEEDAADDGDATTAT
ATDEVPAASGAPSE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaagaaaatacgcctatggaaccgccgagtgacggcatttcgtcgatcaacatc
gtcgacgagatgaagacttcctatctcgattacgcgatgagcgtgatcgtcagccgcgcg
ctgcccgacgtgcgcgacggcctgaagccggtgcaccggcgcattctctattcggcttat
gaaagcggctatgtcgccagcaagccctaccgcaagtcggcgcgcatcgtcggcgacgtc
atgggtaaatatcacccgcacggcgacagctcgatctacgacgcccttgcgcgcatgacg
caggactggtcgatgagcgtcccgctcatcgacggccagggcaatttcgggtcgatggat
cccgatccgccggcggcgatgcgctacaccgaatcgcgcctcgccaaggttgcgatcacc
ctgctcgacgacctcgacaaggacacggtcgacttccagcccaactacgacggctccgaa
agcgagccgacggtgctgccggcgcgctaccccaacctgctcgtcaacggcgcgggcggc
atcgcggtcggcatggcgaccaacatcccgccgcacaatctgggcgaggtgatcaccgcg
acgcttgcgacgatggccaatcccgcgatcacgctcgaagagctgatgggcatcgtcccc
ggccccgatttcccgaccggcgcgatgatccttggccagggcggcgcgcgcaacgcctat
gccaccggccgcggttcgatcatgatgcggtcgacgcacacgatcgaggaaggccgcggc
gaccgccgttcgatcgtgctcacctcgatccccttccaggtcggcaagtcgggcctcgtc
gaaaagatcgccgaagccgcgcgcgacaagcgcatcgagggcgtcgccgacatccgcgac
gaatcgaaccgcgagggcgtgcgcgtcgtgatcgacctcaagcgcgatgcgacccccgac
gtcgtgctcaaccagctctggcgccacaccccggcgcagtcgagcttccccgccaacatg
cttgcgatccgcggcggccgccccgaaatgatggggctgaagacgatcctcgaggcgttc
atcaccttccgcgaggatgtgatcacccgccgctgcaaatacgaactcgccaaggcacgc
gaccgcgcgcacatcttgctcgggctcgtcgtcgcggtgagcaacctcgacgaggttgtg
cggatcatccgcggctcgtcgagccccgcgatggcgcgcgaggcgctgctcgtgcgcgaa
tggccgatcggcgagatcgcgccctacatccgcctcgtcgaggcgatcgagggcgaggcc
gagaacgcgaccacctatcgcctgtccgaaatccaggtgaaggcgatcctcgacctccgc
ctgcatcgcctgaccgcgcttggtcgcgatgaaatcggaaacgaactcaaggaactggcg
agtgagattgaggagctgctttcgatcctcgccgaccgcgacaagctctatgcggtgatg
cgcgaagagcttgaagcggtgcgcgacgaattcgccaagccgcgccgcaccctcgtcgcc
cccgccgccgacggcatcgacgacgaggatctgatcgagcgcgaggagatggtcgtcacc
gtcaccctcgacggctatatcaagcgcaccccgctcgagaccttccgcgcccagcgccgc
ggcggcaagggccgcgccggcatggcgacgaaggacgaggatgtcgtcaccaacctgttc
gtcacctcgacgcacacgccggtgctcttcttctcgaccgcgggcaaggtgtaccgcatg
aaggtgtggcgcctgcccgagggtggacccgcgacgcgcggccgtccgatgatcaacctg
ctgccgctcgccaccggcgagaccatctcgaccgtgctcccgcttcccgagaacgaggac
gaatggggcaaattgcacgtgatgtttgcaaccgccaagggcagcgtgcgtcgtaacagc
atggacgccttcaccaatgtgccctcgaacggcaagatcgccatgaaattcgaaggcgag
gacgaggacgaccggctgatcggcgtcgcgctgctcgacgaaagcgacgacgttctcctc
gcgacgcgccagggcaaggcgatccgcttccccggcgaggatgtccgcgagttccagagc
cgcaactcgaccggcgttcgcggtatgcggctcggtgccggcgacgaggtcatctcgctg
tcgatcctgcacaaggcgggcattcgcgatcaggaagagcgcgaggattatctgcgccac
gccccgtggaaggccgaaaaggacagcgacccgcaaatggaggccgcacgcttcgacgag
ctcaggacgaaggaacagttcatcctcaccgtctgcgccaacggctatggcaagctgtcg
tcggcctatgaatatcgccgtacgggccgcggcggccaggggatcaccaacatcgacaat
atcggccgcaacgggccggtcgtggcgagcttccccgcaacgcaggcgcaccagctgatg
ctcgtcaccgatcaggcgaagcttatccgcatggggctcgacagcctgcgcgtgatcggc
cgcggatcggcgggcgtgcgcctgttcgacgtcgccaaggacgaacatgtcgtctcggcg
gcgctgatcgaggaaggcgaggaagacgccgccgacgatggcgacgcaacaaccgcgact
gcgaccgacgaggtgccggcggcaagcggggcgccgtcggaatga
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