Sphingopyxis sp. YF1: EAO27_08475
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Entry
EAO27_08475 CDS
T10727
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
spyf Sphingopyxis sp. YF1
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EAO27_08475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spyf03019
]
EAO27_08475
03009 Ribosome biogenesis [BR:
spyf03009
]
EAO27_08475
04131 Membrane trafficking [BR:
spyf04131
]
EAO27_08475
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spyf04147
]
EAO27_08475
Messenger RNA biogenesis [BR:
spyf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EAO27_08475
Ribosome biogenesis [BR:
spyf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
EAO27_08475
Membrane trafficking [BR:
spyf04131
]
SNARE
SNARE associated proteins
Others
EAO27_08475
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EAO27_08475
Exosome [BR:
spyf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EAO27_08475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_33
AAA_5
CDC48_2
AAA_2
AAA_14
TIP49
IstB_IS21
AAA_18
Mg_chelatase
AAA_28
nSTAND3
AAA_7
AAA_lid_PRS2_C
ABC_tran
NPHP3_N
RNA_helicase
ATPase
AAA_24
Sigma54_activat
AAA_17
Vps4_C
AAA_30
AAA_3
DUF815
Zeta_toxin
AAA_11
AAA_19
AAA_25
TsaE
Viral_helicase1
Parvo_NS1
NB-ARC
Sigma54_activ_2
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
UNU42736
LinkDB
All DBs
Position
complement(1778909..1781230)
Genome browser
AA seq
773 aa
AA seq
DB search
MADATVKEKQVKLQVANARAEESGGGIARIPRSAMAELGLAEGDVVQISGKRDTASRVVA
PYAEDEGLDVIRLDGLQRANAGAGAGDMVALSRVETRPATRVVFAPAQENLRLQGSANAL
KRSFFGRPLVAGDTVATAGQQRVSAGDMPPQLRQMLNAPAYALAEVRLLVVSASPKGVVF
IDENTEVELLPEYQEPQDARRTDVTYDDLGGLGETIDQLREMVELPLRYPELFRRLGVDP
PRGVLLHGPPGTGKTRLARAVANESEAQFFLINGPEIMGSAYGESEKRLRDVFEQAAKAA
PSILFIDEIDSIAPKRGQVTGEAEKRLVAQLLTLMDGLEPRTNLVVIAATNRPDAIDEAL
RRPGRFDREIVIGVPDEKGRREILGIHTRGMPLGEDVDLDELARTTFGFVGADMAALTRE
AAIEAVRRIMPKLNLEEGTIPPEVLEELRVTRDDFTNALKRVQPSAMREVMVQAPTTRWS
DIGGLDAARDKLIEGIELPLKHPEAFRRLGIRPAKGFLLYGPPGTGKTLLAKAAARESDA
NFISIKSSDLLSKWYGESEQQIARLFQRARAVAPTIIFIDELDSLVPARGSGSSGEPQVT
ERVVNTILAEMDGIEEMQSVVVIGATNRPNLIDPALLRPGRLDELIYVSVPNAEGRKRIL
EIQTGKMPLADDVDLLALAEKTARFTGADLEDLTRRAGLAALKRSMDSETVTMADFEASL
KDTRASVTEAMEKDYEKIQGEIKQAAMSVDPIGFFAPGMLKPSRERKHEEPRD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggccgatgcgacggtgaaagaaaaacaggtcaaactgcaggttgcgaacgcccgcgcc
gaggaaagcggcgggggtatcgcacgcattccgcgatcggcgatggccgagctgggactc
gccgagggcgacgtcgtccagatcagcggcaagcgcgacaccgcgtcgcgcgtcgtcgct
ccctatgccgaggatgaagggctcgacgtgatccgcctcgacggcctgcagcgcgccaat
gccggcgcgggcgcgggcgacatggtcgcgctgagccgcgtcgagacgcgccccgcgacg
cgcgtcgtctttgcccccgcgcaggagaatctgcgcctccagggatcggccaatgcgctc
aagcgcagcttcttcggccgtccgctggtcgccggcgataccgtcgcgacggcggggcag
cagcgcgtgtcggcgggcgacatgccgccgcaactgcgccagatgctcaacgcgcccgcc
tatgcactcgccgaggtgcgcctgctcgtcgtgtcggcgagccccaagggcgtcgtcttc
atcgacgagaataccgaggtcgagctgctccccgaatatcaggagccgcaggatgcgcgg
cgcaccgacgtgacctatgacgacctcggcgggctgggcgagacgatcgaccagctgcgc
gagatggtcgagctgccgctgcgctaccccgagctgttccgccgtctgggcgtcgatccg
ccgcgcggggtgctgctgcacggcccgccgggaacgggcaagacgcggctggcgcgcgcg
gtcgcgaacgagagcgaggcgcaattcttcctgatcaacgggcccgagatcatggggtcc
gcctatggcgagtccgaaaaacgcctgcgcgatgtgttcgagcaggcggcgaaggccgcg
ccgtcgatcctgttcatcgacgagatcgattcgatcgcgccgaagcgcgggcaggtgacc
ggcgaggccgaaaaacgccttgtcgcgcagctcttgacgctgatggacgggctcgagccg
cgcaccaatctggtggtgatcgccgcgaccaaccgccccgatgcgatcgacgaggcgctg
cggcgcccgggccgtttcgaccgcgagatcgtgatcggcgttcccgacgagaagggacgc
cgcgagatactgggcatccatacgcgcggcatgccgctgggcgaggatgtcgacctcgac
gaactcgcgcgcacgacctttggttttgtcggcgccgacatggcggcgctgacgcgcgaa
gcggcgatcgaggcggtgcggcggatcatgcccaagctcaacctcgaggaaggaacgatc
ccgcccgaggtgctggaggaactgcgcgttacccgcgacgatttcaccaatgcgctgaag
cgcgtccagccgtcggcgatgcgcgaagtgatggtgcaggcgccgacgacgcgctggagc
gacatcggcgggctcgatgccgcgcgcgacaagctgatcgaagggatcgagctgccgctg
aagcaccccgaggcgttccggcggctcggcattcgcccggccaagggtttcctgctctat
ggcccgccggggacgggcaagacgctgctcgcaaaggccgcggcgcgcgagtccgacgcg
aacttcatctcgatcaaatcgtcggacctgctctccaaatggtatggcgagagcgagcag
cagatcgcgcggctgttccagcgcgcgcgcgcggtggcgccgacgatcatcttcatcgac
gagctcgacagcctggtgcccgcgcgcggcagtggttcgtcgggcgagccgcaggtgacc
gagcgtgtggtcaacacgatcctcgccgagatggacgggatcgaggagatgcagtcggtc
gtcgtgatcggcgcgaccaatcgcccgaacctgatcgatcctgcgctgctgcgcccggga
cggctcgacgagctcatctatgtgtcggtgcccaatgccgaggggcggaagcgcatcctc
gaaatccagaccggcaagatgccgctggcggacgacgtcgacctgctggcgctggccgag
aagaccgcgcgcttcaccggcgccgacctagaggatctgacgcgccgggcggggctcgcc
gcgctcaagcgatcgatggacagcgaaacggtgacgatggccgacttcgaagcttcgctc
aaggacacccgtgcctcggtgaccgaggcgatggagaaggattatgaaaagatccagggc
gagatcaagcaggccgcgatgagcgtcgacccgatcggcttcttcgcgccgggcatgctc
aagccgtcgcgcgaaagaaagcacgaggaaccaagagactag
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