Sphingopyxis sp. YF1: EAO27_08560
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Entry
EAO27_08560 CDS
T10727
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spyf Sphingopyxis sp. YF1
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spyf03016
]
EAO27_08560
Enzymes [BR:
spyf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EAO27_08560
Transfer RNA biogenesis [BR:
spyf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EAO27_08560
Prokaryotic type
EAO27_08560
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Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UNU42748
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All DBs
Position
1802228..1803292
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AA seq
354 aa
AA seq
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MGKGKWAVLPLVLIALGGWLFQRPVGMWIFDRAVERSAARNPYADLPDGLHVGLCGTGSP
LPSRDRAAACTVVIAGKTMLVVDAGEGGARNIAQMGLPNGRIRGLFLTHYHSDHIDGLGP
MMLLRWTASGNQSPLPVHGPTGVEDVIAGFNTAYARDNGYRTAHHGPAITPPAAAGAIAR
PFAIPSAPTIVYETDGLRVTAFPVDHRPVAPSVGYRFDYKGRSVVISGDTGPSKMLEQAS
RDADILIHEALQPRMVKALAAALDKAGRGQTAQIMRDILDYHATPAQAADSARVAGVKML
VLSHLVPSMPSPYLNAAFLDGAGEHFDGPIIVGEDGQYFSLPAGSDAIERGSWF
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggcaaatgggcggtgctgccgctcgtcctgatcgcactgggcggctggctg
ttccagcgaccggtcggcatgtggatcttcgatcgcgcggtcgagcgcagcgccgcgcgc
aatccttatgccgacctgcccgacggactccacgtcggcctttgcggcaccggatcgccg
ctgcccagccgcgatcgcgccgccgcctgcaccgtcgtcatcgcgggcaagacgatgctg
gtcgtcgatgcaggcgaaggcggcgcgcgcaacatcgctcaaatgggcctgcccaacggg
cggattcgcggactgttcctgacgcactatcattcggaccatatcgacgggctggggccg
atgatgctgctgcgctggaccgccagtggcaaccaaagcccgcttcccgtccatggcccg
acaggggtcgaggacgtgattgcgggcttcaacaccgcttacgcccgcgacaatggctat
cgcaccgcacatcacgggccggcgatcaccccgcccgcggcggccggcgcgatcgcccgg
ccctttgcgatcccgtccgcaccgacgatcgtctacgaaacggacgggctgcgcgtcacc
gcctttccggtcgaccaccgccccgtcgcgccttcggtcggctatcgcttcgattacaag
ggccgcagcgtcgtgatcagcggcgacaccggtccgtcgaagatgctcgaacaggcctca
agggacgccgacatcctcatccacgaagcgctccagccccggatggtgaaagcgctcgcc
gccgcactcgacaaggcgggccgcggacagaccgcacagatcatgcgcgacatcctcgac
tatcacgccactccggcgcaggcggccgacagcgcgcgtgtcgcgggggtgaaaatgctg
gtgctgagccacctcgttccgtcgatgccctcgccctatctgaacgcggccttcctcgac
ggcgcgggagagcatttcgacgggccgatcatcgtcggcgaagacggacagtatttttcg
cttcccgcgggaagcgatgcgatcgagcgcggcagctggttctag
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