Sphingopyxis sp. YF1: EAO27_09945
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Entry
EAO27_09945 CDS
T10727
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EAO27_09945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spyf02000
]
EAO27_09945
Transporters [BR:
spyf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EAO27_09945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UNU45050
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All DBs
Position
2082958..2084472
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AA seq
504 aa
AA seq
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MPPTIDIPAKKRLMLRAGAAGLLALTLGSCGLFGEAGPVRIAAIGTLAASPSPINGELDA
ANAALLNLSAQGLVTFDAEGQVDVGLAERWTVTADGRSYIFRIREAKWANGRKVTTADVA
RILQSYLAPRSRHVLKDDFPEIETIKAMTETVVEIRLSVPQPAILELLAQPSMAIVNRGL
GWGPMRARRNGRSALLSPVPDPLAEDPEAAEAAAADPAASIELTGTTAPRALARFKNGYA
DGVVGGRFSTLPYFAASNIGRSRLVVDPVPGLFGLSFVSDEGFLAVQANREALSRAIRRE
RLIAAFGLQEWEPQMTLRPDLYTRDTGPAPLLPAWADYDEQSRFVQAQRTIDAWRAGGRE
IETLRIAVPDSPGGRILFAYVAADLARLGVPTRRVATGAPAELRLIDEVMPNDDALWGLR
RLSCRPDTICHRDAQALIDEAAAAPNAAERARLIGEAEVRLAGYSPFIPIATPLRWSVAA
QRLTALRANGRGQHPLNRLIALPR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgacgatcgatatccccgcgaagaaaagactgatgctacgggccggcgccgcc
ggactgctggcgctgacgctcggcagctgcgggctgttcggcgaggcggggccggtgcgc
attgcggcgatcgggacgctcgccgcttcgccgagcccgatcaacggcgagctcgacgcc
gcgaatgcggcgctgctcaacctcagcgcgcagggcctcgtcaccttcgacgccgaggga
caggtcgacgtcggcctcgccgaacgctggacggtcaccgccgacggccgcagctatatc
ttccgcattcgcgaggccaaatgggcgaacggtcgcaaggtcaccaccgccgacgtcgcc
cgcatcctgcaatcctatctcgcgccgcgcagccggcacgtgctcaaggacgatttcccc
gaaatcgaaacgatcaaggcgatgaccgaaacggtggtcgagatccgcctgtcggtgccg
caaccggcgatcctcgaactgctcgcacagccctcgatggcaatcgtcaaccgcgggctc
ggctgggggccgatgcgcgcgcggcgcaacggccggtcggcgctgctgtcgccggtcccc
gacccgctggccgaagaccccgaggcggccgaggccgcggcggcggatcccgccgcgtcg
atcgaactcaccggcaccaccgcgccgcgtgcgctcgcgcgcttcaaaaatggctatgcc
gacggcgtcgtcggcgggcgcttctccacccttccctatttcgcggcttcgaacatcggg
cgctcgcgcctcgtcgtcgatccggtgcccgggctgttcgggctcagcttcgtcagcgac
gagggctttctcgcggtgcaggccaatcgcgaagcgctgtcgcgcgcgatccgccgcgaa
cggctgatcgccgccttcgggcttcaggaatgggagccgcagatgacgctgcgtcccgat
ctctacacgcgcgacaccggcccggcgccgctgctgccggcgtgggccgactatgacgaa
cagtcgcgcttcgtgcaggcgcagcgcacgatcgacgcgtggcgcgcgggcggacgcgaa
atcgaaacgctgcgtatcgcggttcccgattcgcccggcgggcgcatcctcttcgcctat
gtcgccgccgatcttgcccgcctcggcgtaccgacccgccgcgtcgcgacgggcgcccct
gccgagctccgcctgatcgacgaggtgatgcccaacgacgacgcgctgtggggcctgcgc
cgcctgtcgtgccgacccgacaccatctgtcaccgcgatgcgcaggcgctgatcgacgaa
gccgccgcggcgccgaacgccgccgagcgcgcgcggctgatcggcgaggccgaagtgcgg
ctggcgggctattcgcccttcatcccgatcgcgacgccgctgcgctggtcggtcgcggcg
cagcggctgaccgcgctgcgcgccaacggccgcggccagcaccccttgaatcgccttatt
gccttacccagataa
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