Sphingopyxis sp. YF1: EAO27_11780
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Entry
EAO27_11780 CDS
T10727
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf00061
Fatty acid biosynthesis
spyf00071
Fatty acid degradation
spyf01100
Metabolic pathways
spyf01212
Fatty acid metabolism
spyf02024
Quorum sensing
spyf04146
Peroxisome
Module
spyf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EAO27_11780
00071 Fatty acid degradation
EAO27_11780
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EAO27_11780
09145 Cellular community - prokaryotes
02024 Quorum sensing
EAO27_11780
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spyf01004
]
EAO27_11780
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spyf04147
]
EAO27_11780
Enzymes [BR:
spyf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EAO27_11780
Lipid biosynthesis proteins [BR:
spyf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EAO27_11780
Exosome [BR:
spyf04147
]
Exosomal proteins
Exosomal proteins of breast milk
EAO27_11780
Exosomal proteins of breast cancer cells
EAO27_11780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
UNU43316
LinkDB
All DBs
Position
complement(2443090..2444919)
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AA seq
609 aa
AA seq
DB search
MKLENPHLDQFPSLVAMFFDRADKGGDDPFLWRKADRAWQPLSWREVAEQVAALAHNLRK
LGLKEGDRVVLVSENRPEWCIADLGIMAAGCITVPTYTTNTERDHQHILDNSGARAVIVS
TAKLARVLMPAVMRSDAQHVITMESLRVGQQGDVRIHDWAPLVEGGATFVEETRARGLGV
KRADTACLIYTSGTGGAPRGVMQHHGAILHNAAGAAEVLVNDFGIGDEEVFLSFLPLSHA
YEHSGGQFLPIMVGAQIYYSEGLEKLVSNIEETRPTIMVVVPRLFEVIRARMIKSVEKQG
KLANWMLGQALRVGEKDYERRMGVLDRPVDLILDKLFRPKIQKRFGGRMKALVSGGAPLN
PEIGVFFHSIGLTLLQGYGQTEAGPVISCNRPSAGIKMDTVGPPLMNTEVRIADDGEILV
RGELVMKGYWRNQAETERVLVPDPAEPGGAPWLHTGDIGHIDDKGRIVITDRKKDLIVND
KGDNVSPQRVEGMLTLQPEILQAMVYGDKRPHLVGILVPDPEWAFEWAEAEGLPKDIKLL
REHEKFRAALREAVDRVNAQLSVIEKVRKFDFADEAFTIENEQMTPSMKIRRHVLRDVYA
DRIAALYRG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggaaaacccccatctcgaccaatttccgagtctggtcgcgatgttcttcgac
cgcgcggacaagggcggcgacgaccccttcctgtggcgcaaggccgaccgcgcgtggcag
ccgctctcgtggcgcgaggtcgccgaacaggtcgcggcgctggcgcacaacctccgcaag
ctggggctgaaggagggcgaccgtgtcgtgctggtgagcgagaaccggcccgaatggtgc
atcgcagacctcggcatcatggccgcgggctgcatcaccgtgccgacctacaccaccaac
accgaacgcgatcaccagcacatcctcgacaacagcggcgcgcgcgcggtgatcgtgtcg
accgcaaagctggcgcgggtgctcatgcccgcggtgatgcgctccgacgcgcagcacgtg
atcacgatggaaagcctgcgcgtcggccagcagggcgacgtgcgcatccacgactgggcg
ccgctggtcgaaggcggagcgaccttcgtcgaggagaccagggcgcgcgggctcggcgtc
aagcgcgctgacaccgcctgcctgatctacaccagcggcaccggcggcgcgccgcgcggc
gtgatgcagcatcatggcgcgatcctgcacaatgccgcgggcgcggccgaggttctcgtc
aacgacttcggcatcggcgacgaggaggtgttcctgtcgttcctgccgctgagccacgct
tacgagcattcgggcgggcagttcctgccgatcatggtcggcgcgcagatctattacagc
gagggcctcgaaaagctcgtttcgaacatcgaggagacgcgcccgacgatcatggtcgtc
gtgccgcggctgttcgaggtgatccgcgcgcggatgatcaagtcggtcgaaaaacagggc
aagctcgccaactggatgctgggccaggcgctgcgcgtcggcgaaaaggattatgagcgg
cgcatgggggtgctcgaccgcccggtcgacctcatcctcgacaaattgttccgccccaag
atccagaagcgtttcggcggtcggatgaaggcgctggtgtcgggcggcgcgccgctcaac
cccgaaatcggtgtgttcttccactcgatcgggctgaccctgctccagggctatggccag
accgaagcggggccggtgatcagctgcaaccgcccgagcgcggggatcaagatggacacc
gtcggcccgccgctgatgaacaccgaggtccggatcgccgacgacggcgagatcctcgtc
cgcggcgaactggtgatgaagggctattggcgcaaccaggccgaaaccgagcgcgtgctg
gtgcccgatcccgccgaacccggcggcgcgccctggctgcacaccggcgacatcggccat
atcgacgacaagggccgcatcgtcatcaccgaccgcaagaaggacctgatcgtcaacgac
aagggcgacaatgtctcgccgcagcgcgtcgagggcatgctgacgctccagcccgagatc
ctgcaggcgatggtctatggcgacaagcgtccgcaccttgtcggcatcctcgtgcccgat
cccgaatgggccttcgaatgggccgaggcggaggggttgcccaaggatatcaagctgctg
cgcgaacatgaaaagtttcgcgccgcgctgcgcgaggcggtcgaccgcgtcaacgcgcag
ctctcggtgatcgaaaaagtgcgcaagttcgatttcgccgacgaggcgttcacgatcgag
aacgaacagatgaccccgtcgatgaagatccgccgccacgtgctccgcgacgtgtacgcc
gaccggatcgccgcgctgtaccgggggtag
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