KEGG   Sphingopyxis sp. YF1: EAO27_12645
Entry
EAO27_12645       CDS       T10727                                 
Name
(GenBank) PDZ domain-containing protein
  KO
K02452  general secretion pathway protein C
Organism
spyf  Sphingopyxis sp. YF1
Pathway
spyf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:spyf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EAO27_12645
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spyf02044]
    EAO27_12645
Secretion system [BR:spyf02044]
 Type II secretion system
  General secretion pathway protein
   EAO27_12645
SSDB
Motif
Pfam: T2SSC PDZ_2 PDZ_6 PDZ PDZ_Tricorn
Other DBs
NCBI-ProteinID: UNU43467
LinkDB
Position
complement(2633959..2634828)
AA seq 289 aa
MATLMSGSAVRLPRALPAWLRPRRKSPRALAPLLLAGLLGFLLVWQAVRLVWALIVPLSP
LGAWQPQAAVIASPAERRALFASFDPFFRTGGQGAANATVTALGLTLYGINLNEATGGGS
AIIAGEDGVQSSYAVGDEIAPGVKLAGVAFDHVLLDRGGARESLFLDQSGEAAVAAPATP
LPAPTPEVGAAPATGGELSPAALKAGVGFAPRTEDGRVTGVTVQSQGDGAAFRAAGLRPG
DVIRGVNGRPIGSAGDAAALAGQLTPGARLSLEVERGASVVPIAIFVSK
NT seq 870 nt   +upstreamnt  +downstreamnt
atggcgacgctgatgtccggatcggccgttcggttgccgcgtgcgctgccggcatggctg
cgcccgcgccgcaaatcgccgcgcgcgctcgcgccgctcctccttgccggactgctcggc
ttccttctcgtctggcaggcggtgcgcctcgtctgggcgctgatcgtgccgctgtcgccg
ctcggcgcgtggcaaccgcaggcggcggtgatcgcctcgcccgccgaacgccgcgcgctc
ttcgccagcttcgacccttttttccgtaccgggggacagggcgccgcgaacgccaccgtc
accgcgctcggcctgacgctctacggcatcaacctcaacgaggcgaccggcggcggttcg
gcgatcatcgctggcgaggacggggtgcagtcgagctatgccgtcggcgacgagatcgcg
ccgggggtcaagcttgccggcgtcgccttcgaccatgtgctgctcgatcgcggcggtgcg
cgcgaaagcctgttcctcgaccagagcggcgaggccgcggtcgccgcgcccgcgaccccg
ttgcccgcgccgacccccgaagtgggggctgccccggcgaccggcggcgaactttcgccc
gccgcgctcaaggcgggcgtcggcttcgcgccgcgtaccgaggacgggcgcgttaccggc
gtcaccgtccagtcgcagggcgacggggcggccttccgcgccgcgggcctgcgccccggc
gacgtgatccgcggcgtcaacggccggccgatcggctcggcgggcgacgccgccgcgctc
gcgggtcagctgactcccggcgcgcgcctctcgctcgaggtcgaacgcggcgccagcgtc
gttcccatcgccatatttgtctcgaagtag

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