Sphingopyxis sp. YF1: EAO27_12950
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Entry
EAO27_12950 CDS
T10727
Symbol
traA
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
spyf Sphingopyxis sp. YF1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
AAA_19
Viral_helicase1
TraI_hel_assoc_N
PIF1
SH3_13
AAA_11
AAA_22
AAA_16
PhoH
Herpes_Helicase
Helicase_RecD
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UNU43522
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Position
2706868..2709753
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AA seq
961 aa
AA seq
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MAIFHLSVKVISRSSGRSAVAAAAYRGGERLHDERLDRDHDFTNKDGVIHSEVLLPEGAP
GEFADREKLWNAVEAAEKRKDAQLSREVEFAIPRELTKEQGIELAREFAEAEFVEKGMIA
DLNVHWDIGADGQPKPHAHVMLTMREVGKDGFGAKVRDWNKAELVEQWRERWADHVNQRL
AELDIDARIDHRSLEAQGIALEPQDKIGPAASRMGVRGLEAERIEEHRAVAQRNGERIIA
NPAVALDAITHQQATFTKRDLAMFVHRHSDGKEQFDLAMGAVRGSSDLIALGKDGRGEER
FTSRQMIETEQRLGRASELLAERERHQVEDRGREGALARVAERGLALSGEQRAAFEHVTD
GRGLSVVVGYAGTGKSAMLGVAREAWESAGYTVHGVALSGIAAEGLEHGSGIASRTIASL
EQQWGQGREMLTSRDVLVIDEAGMVGTRQMERVLSHAADAGAKVVLVGDPQQLQAIEAGA
AFRAIHERHGGVEIAEVRRQHDGWQQEATRHLATGRTGLAIQAYGERGMVHVAETREAAR
SELIERWDRDRQASPGDTRIILTHTNDEVRELNDAARGKLRASAELGNDVTVRTERGERQ
FASGDRIMFLRNERGLGVKNGTLGTVEQVTPQGMAVRTDDGRNVAFETKDYAHIDHGYAA
TIHKAQGMTVDRAHVLATPGMDSHGAYVALSRHRDGVALHYGRDDFADQSKLVRTLSRER
GKDMASDYKPEQAFAERRGITFRERIVEIARQLPERAKSIFANFRPQAQKLEALPSDQAG
LSDQRRAVERYARAAADIGQMREQGLPVLPHQRDALEKAGKALDAIRPYGAADLASALQR
QPSLAREAADGRSQGAIRAMQLEAEIRIDPTQRADRFVSDWQRLGQARQAMQRDGDTRGA
QRLTSRMTDMAKSLERDAQVESLLRGRTRELGIKTELGRDLARDLAASITMERSRSIGMG
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcttccacctctccgtcaaagtcatcagccgttcgagcgggcgcagcgctgtg
gccgcagcagcctatcgcggcggcgaaaggctgcacgacgagcgcctcgaccgcgaccat
gacttcaccaacaaggacggggtcatccattccgaagtgctgttgcccgagggcgcaccg
ggggaattcgccgacagggaaaagctctggaacgcggtcgaggctgccgaaaagcgcaag
gatgcgcagctgtcccgcgaggttgaattcgccattccgcgcgagcttaccaaggaacag
ggcatcgagctggcgcgggagtttgccgaagccgagtttgtcgaaaagggcatgattgcc
gacctcaatgtccattgggacattggcgctgacggccagcccaaaccccatgcccatgtc
atgctcaccatgcgcgaagtcggcaaagacgggttcggcgcgaaggtgcgcgactggaac
aaggccgaactggtcgagcagtggcgcgagcgctgggccgatcacgtcaatcagcgcctg
gccgaactcgatattgacgcacggatcgatcatcgcagcctggaggcgcagggcattgcg
ctggagccgcaggacaagatcggccccgccgcttcacgcatgggagtgcgcgggctggag
gccgaacgcatcgaggaacatcgcgccgtcgcgcagcgcaacggcgagcggatcatcgcc
aatcccgctgtcgcactggacgcgatcacgcaccagcaagccaccttcaccaagcgcgac
cttgccatgttcgtgcatcggcacagcgacggaaaggagcagttcgacctggccatgggc
gccgtgcgcggatcgtctgacctgatcgcgctgggcaaggacggacgcggcgaagagcgg
ttcacttcgcgccagatgatcgagactgaacagcgccttggtcgcgcatcggaattgctc
gcggagcgcgagcggcatcaggtcgaagatcgtggccgggaaggcgcgctggcgcgcgtg
gcggagcgcggccttgcgctttccggcgagcagcgcgcggcgttcgagcatgtgaccgat
gggcgcggcctcagcgtcgttgtcggctatgccgggaccggcaagagcgcgatgctgggc
gtagcgcgcgaggcatgggagagcgctggctataccgttcacggcgtggcgctgtccggc
attgccgccgaggggctggagcacggttcgggcattgcctcgcggaccattgccagcctt
gagcagcagtggggccagggccgcgaaatgctcacctcgcgcgacgtgctggtgatcgat
gaggcaggcatggtcggcacgcgccagatggagcgtgtgctctcccatgcagccgatgca
ggcgcgaaagttgttctggtcggcgacccgcagcagctccaggctatcgaagccggggcc
gccttccgcgcaatccatgaacgccacggcggcgtcgaaatcgccgaagtgcgccgccag
catgacggctggcagcaggaggccacgcggcatctcgctaccgggcgcaccggtcttgcc
attcaggcctatggcgaacggggcatggtccatgttgccgagacccgggaggcagcgcgc
agcgaactgatcgagcgttgggaccgcgaccggcaggccagtcctggcgatacgcggatc
attctcacccacaccaatgacgaggtgcgcgaactcaatgacgcggcgcgcggaaagctg
cgcgccagtgccgagctgggcaacgacgtgaccgtccgcaccgagcggggcgagcgtcag
ttcgccagcggcgaccgcattatgttcctacgcaatgagcggggcctgggcgtcaagaat
ggcacactcggcaccgtcgagcaggtgacaccgcaaggcatggctgtgcgcaccgacgat
ggccgcaacgtcgctttcgagaccaaggattatgcgcacatcgatcacggctatgccgcc
acgatccataaggcgcagggcatgacggtggatcgggcacacgtgctggccacgccaggc
atggatagccacggggcctatgtcgcgctttcgcgccatcgtgacggcgtggccctgcac
tatggccgcgacgacttcgccgatcagtcgaaactggtccgcacgctgagccgcgagcgc
ggcaaggatatggccagcgactacaagcccgagcaagcattcgccgagcggcgcggcatt
accttccgcgagcggattgtcgaaatcgcccgtcagttgccggagcgagcaaagtcgatc
ttcgccaatttccggccccaggctcagaaactcgaagcactgccaagcgatcaggctggc
ctgtccgatcagcgccgagcggtcgaacgctatgcccgcgccgccgccgacatcgggcag
atgcgtgaacagggattgccggtcctcccgcatcagcgcgacgcgctggagaaggccggg
aaggcgcttgatgcgatccggccatatggcgccgccgacctcgccagcgccttgcagcgc
cagccctcgctggctcgtgaggccgctgatggacgcagccagggcgcgatccgcgccatg
cagcttgaagccgaaatccgcatcgaccccacacagcgcgccgaccgctttgtcagcgac
tggcagcgccttgggcaggcacgacaggccatgcagcgcgatggcgacaccaggggcgcg
cagaggctcaccagccgcatgacggacatggcgaagagcttggagcgcgacgcgcaagtc
gagtccctgctgcgcggtcgcacccgcgagcttggcatcaagacagaactcggtcgcgat
ctggcccgcgacctagccgcttccatcacgatggaacggagccggtcaatcggcatgggc
ctgtag
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