Sphingopyxis sp. YF1: EAO27_15475
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Entry
EAO27_15475 CDS
T10727
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf00300
Lysine biosynthesis
spyf00470
D-Amino acid metabolism
spyf01100
Metabolic pathways
spyf01110
Biosynthesis of secondary metabolites
spyf01120
Microbial metabolism in diverse environments
spyf01230
Biosynthesis of amino acids
Module
spyf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EAO27_15475
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EAO27_15475
Enzymes [BR:
spyf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
EAO27_15475
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UNU43972
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Position
3242490..3243296
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AA seq
268 aa
AA seq
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MADRFTKMHGLGNDFVVIDAREAPVAMTAARAHAIADRRHGIGCDQLILLEPSEKADVRM
RIFNADGGEVEACGNATRCVATLIGKPAVIETLGGMLRVAPADGGAEVTLGEPEFDWEHI
PLAMPMDTRDMPVAWDELEHGAAVNVGNPHIIFFVPEADAIPLADLGPRIETDPLFPERV
NVNVASLDGPDRLQLRVWERGVGLTQACGTGACATAVAAIRAGKVASPVTVSLPGGDLII
RWAPGEPIVMSGAATRVFDGETDWAQFG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgcttcaccaagatgcacgggctcggcaatgatttcgtcgtgatcgacgcg
cgagaggcgccggtcgcgatgacggcagcgcgcgcccacgcaatcgccgaccggcggcac
ggcatcggctgcgaccagttgatcctgctcgaaccgtcggagaaggccgacgtgcgcatg
cgtatcttcaacgccgacggcggcgaggtcgaggcgtgtggcaatgcgacgcgctgcgtc
gcgacgctgatcggcaagcccgccgtgatcgagacgctgggcgggatgctgcgcgtggcg
cccgccgacggcggcgcggaagtgacgctgggtgaacccgaattcgactgggagcatatc
ccgctagcgatgccgatggacacgcgcgacatgcccgtcgcgtgggacgaactggagcat
ggcgcggcggtcaatgtcggcaatccgcacatcatcttcttcgtacccgaagccgatgcc
attcccttggccgacctcggcccgcggatcgagaccgacccgctcttccccgagcgcgtc
aacgtcaatgtcgcgagcctcgacggccccgaccgtttgcaactgcgcgtgtgggagcgc
ggcgtcgggttgacgcaggcgtgcggcaccggcgcctgcgcgaccgcggtcgcggcgatc
cgcgcgggcaaggtcgcctcgccggtgacagtctcgctgcccggcggcgacctgatcatc
cgctgggcgcccggcgaacccatcgtgatgagcggcgccgcgacgcgcgtgttcgacggc
gagaccgactgggcccagttcggatga
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