Sphingopyxis sp. YF1: EAO27_15675
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Entry
EAO27_15675 CDS
T10727
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
spyf Sphingopyxis sp. YF1
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spyf03019
]
EAO27_15675 (rapZ)
Messenger RNA biogenesis [BR:
spyf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EAO27_15675 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_33
Rad17
AAA_18
AAA_16
AAA_30
AAA_29
ABC_tran
ZSWIM1-3_C
AAA_27
AAA_28
CoaE
Integrase_1
nSTAND_NTPase5
AAA_21
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
UNU44008
LinkDB
All DBs
Position
3279996..3280931
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AA seq
311 aa
AA seq
DB search
MTEESQRLLLVTGLSGAGKSTVLRVLEDLGWEVVDNLPVALLDALLGAPGGQGREGRPLA
VGIDSRSRGFKPAPLVRRMKELREAGGRDIGTLFLDCAGAELERRFSETRRRHPLAEDRP
AADGIAREREMMEPLRRWAEHVIDTTNYSSNDLQQEVRQRFGDTGTDEPVLSVLSFGFAR
GLPRNADLVFDMRYLRNPHWDTRLRPGTGLDPEVAAYVMTDPAYEASIAQIEQLLLTLLP
RYRAEGKSYVTVAFGCTGGRHRSVHVAERVARTLREAGHAPTVTHRNLDSAPQDGLEGKP
PPASGGKAQGS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggaaagccagcgcctgctcctcgtcacgggcctgtcgggagcgggcaaatcg
accgtgctccgggtgctcgaggatctggggtgggaggtcgtcgacaacctgcccgtcgcg
ctgctcgacgcgctgctcggcgcgcccggggggcagggccgcgaaggccgcccgctcgcg
gtcggtatcgacagccgcagccgcggtttcaagcccgcgccgctggtccggcggatgaag
gaattgcgcgaagcgggcgggcgcgacatcggcaccctgttcctcgattgcgccggcgcc
gagctcgaacggcgcttttcggagacgcgccgccgccacccgctcgccgaggatcgcccc
gccgccgacggcatcgcgcgcgagcgcgagatgatggagccgctgcgccgctgggccgag
catgtcatcgacaccaccaattattcgagcaacgacctgcaacaggaggtgcgccagcgc
tttggcgacaccggtaccgacgagccggtactgagcgtgctgagcttcggtttcgcacgc
ggattaccgcgcaacgccgatctggtgttcgacatgcgctacctccgcaacccgcattgg
gacacgcgcctgcgccccggtacggggctcgatcccgaggtcgccgcctatgtgatgacc
gaccctgcctatgaggcgagcatcgcgcagatcgagcaattgctgctgacattgctgccg
cgctaccgcgccgaaggcaaaagctatgtcaccgtcgccttcggctgtaccggcgggcgc
caccgctcggtccatgtcgccgagcgcgtcgcccgcacgctgcgcgaggcgggccatgcg
ccgacggtgacccaccgcaaccttgactccgccccgcaagatgggcttgagggcaagccc
cctcccgcgtccggcggaaaagcacaagggtcgtag
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