Sphingopyxis sp. YF1: EAO27_17255
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Entry
EAO27_17255 CDS
T10727
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EAO27_17255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spyf03400
]
EAO27_17255
Enzymes [BR:
spyf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EAO27_17255
DNA repair and recombination proteins [BR:
spyf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EAO27_17255
Prokaryotic type
EAO27_17255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UNU44257
LinkDB
All DBs
Position
complement(3625026..3625733)
Genome browser
AA seq
235 aa
AA seq
DB search
MAEVKLHPDWLAHIGGEFEQPYMAQLKAFLADERARGKTIYPRPAHWFAALDATPPQDVR
VVILGQDPYHGPGQAHGLCFSVQPGVRTPPSLVNIYKEMRDDLGIPPARHGYLKSWAEQG
VLLLNNCLTVEAGLAASHQKRGWERFTDAAVAAVAADPAPKVFILWGSHAQKKAANVAGL
ATGSPHLILRAPHPSPLSAHNGFFGSKPFSQANAFLAAHGRSPIDWALPESPAAE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtgaagcttcatcccgactggctcgcgcacattggcggcgagttcgagcag
ccctatatggcgcagttgaaggcgtttctggccgacgagcgcgcccgcggcaagacgatc
tatccgcggcccgcgcactggttcgcggcgctcgacgccaccccgccgcaggatgtgcgc
gtcgtcatcctggggcaggatccctatcacggaccggggcaggcgcacggcctgtgcttt
tcggtgcagccgggggtgcgcaccccgccgagcctggtcaatatctacaaggaaatgcgg
gacgacctcggcatcccgccggcgcgccacggctatctgaaaagctgggccgaacagggc
gtgctgctgctcaacaattgcctgacggtcgaggccggccttgccgcgtcgcaccagaag
cgcggctgggaacgcttcaccgacgccgcggtcgccgcggtcgccgccgaccccgcgccc
aaggtcttcatcttgtggggcagccacgcccagaagaaggcggcgaacgtcgccgggctg
gcgacgggcagcccgcacctgatcctgcgcgcaccgcatccgtcgccgctgtcggcgcac
aacggctttttcgggtcgaagccgttcagccaggcgaacgccttccttgcggcgcacggc
cgcagcccgatcgactgggcgctgcccgaaagtcccgccgccgaatga
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