Sphingopyxis sp. YF1: EAO27_17280
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Entry
EAO27_17280 CDS
T10727
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf00550
Peptidoglycan biosynthesis
spyf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EAO27_17280 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spyf01003
]
EAO27_17280 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spyf01011
]
EAO27_17280 (pbpC)
Enzymes [BR:
spyf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
EAO27_17280 (pbpC)
Glycosyltransferases [BR:
spyf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
EAO27_17280 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
spyf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
EAO27_17280 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UNU44262
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All DBs
Position
3636154..3638307
Genome browser
AA seq
717 aa
AA seq
DB search
MPAKSRIRDALAWLALALLILTTIAHLLTKPPAMPSYDEVRQGWKPSEAWLYDRDGRLLD
SERVDFARRRMAWVPLADIAQPVRSAVVASEDKRYWSHGGVDWLAIASAARTRLNLGGTG
GRSRGASTLPMQLAGFLAPDLALPGQRGWLAKLRQMRAGQALAADWSREQMLEAYFNLVP
LRGETQGIGAGARALFGKKPADMDRTDAALFAGLLPNPAAGAEALGQRACRAARATGRAP
KDCGPLRAAAATLVSGERIAELDPALAPHLAVRLLDKPGKRVTTTIDRRIQEAAIVALRR
QLSGLGADRVRDGAVVVLDNATGDVLAYVGGVGLKSTAAQVDGANARRQAGSTLKPHLYA
QVIEHRWLTAASILDDSPVQLDTASGLYVPKNYDHSFKGPVSVRQALAASLNVPAVRALV
IDDVQQFRDRLWALGYHGIVEDGEYYGFSLALGSAEVSLVEQANAFRTFANSGQWSPVHF
TAARDDRDGPRAVVSPAAAFIVGDILADATARADAFGADSALRLPFWAAAKTGTSKGMRD
NWCVGWSDRFTVAVWVGNLEGDSMRAVSGTSGAAPVWRDVMMALHAGNPGKPPAMPEGVE
AKQIALPGTREPPRREYFIRGTGQAEMAAAPAAARRPRITSPVSGSVYALDPDIPIDRQR
LAVAVSGEVAGYRLLLDKTPLGDADAGQQILPRPGAHMLTLVDPGGRMVDRVRFTVR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaaatcccgcatccgcgacgccctcgcctggctcgcgctcgcgctgctcatc
ctcacgacgatcgcccacctgctcaccaagcccccggcgatgccgtcctacgacgaggtg
cgccagggctggaaacccagcgaggcgtggctctacgaccgcgacggccgcctgctcgac
agcgagcgcgtcgattttgcgcggcgccgcatggcatgggtgccgctcgccgacatcgcg
caaccggtgcgcagcgccgtcgtcgcgagcgaggacaagcgctactggtcgcacggcggg
gtcgactggcttgcgatcgccagcgccgcgagaacccgcctgaacctcggggggaccggc
gggcgctcgcgcggcgcctcgacgctgccgatgcagcttgcgggtttccttgcacccgac
ctcgcgctccccggccagcgcggctggctcgccaagctgcgtcagatgcgcgccggacag
gcgctcgcggcggactggagccgcgagcagatgctcgaggcctatttcaacctcgtgccg
ctgcgcggcgagacgcaggggatcggcgccggggcgcgcgcgctgttcggcaagaaaccc
gccgacatggaccgcaccgacgccgcgctgttcgcgggcctcctccccaaccccgccgcg
ggcgccgaggcgctcggccagcgcgcctgccgcgcggcccgggcgaccgggcgcgcacca
aaggactgcggcccgctccgcgccgccgcggcgacgctcgtctcgggcgagcgcatcgcc
gagctcgatccggcgctcgcgccgcacctcgcagtccgcctgctcgacaagcccggcaag
cgcgtcaccaccacgatcgaccgccgcatccaggaagccgcgatcgtcgcgctccgccgc
cagctttcggggctcggcgccgaccgcgtgcgcgacggtgcggtcgtcgtgctcgacaac
gcgaccggcgacgtgctcgcctatgtcggcggcgtcggtctgaaatcgaccgcggcgcag
gttgacggcgccaacgcgcggcggcaggcgggctcgaccttgaagccgcacctctatgcg
caggtgatcgagcatcgctggctcaccgccgcgtcgatcctcgacgacagcccggtccag
ctcgacaccgcctcagggctctatgtgcccaagaattacgaccacagcttcaagggcccg
gtcagcgtccgccaggcgctcgccgcctcgctcaacgtcccggcggtgcgcgcgctcgtc
atcgacgacgtccagcagttccgagaccggctgtgggcgctcggctatcacggcatcgtc
gaggacggcgaatattacggcttcagcctggccctcggctcggccgaagtgtcgctggtc
gaacaggccaacgccttcaggacctttgcgaattcgggacaatggtcccccgttcacttc
accgcagcgcgcgacgatcgcgacggtccgcgcgcggtcgtctccccggctgccgccttc
atcgtcggcgatatcctcgccgacgcgaccgcccgcgccgacgccttcggcgccgacagc
gcgctgcgcctgcccttctgggcggccgccaagaccggcacctcgaagggcatgcgcgac
aattggtgcgtcggctggtccgaccgcttcaccgtcgcggtgtgggtcggcaatctcgag
ggcgattcgatgcgcgccgtctcgggcacctcgggcgccgcaccggtctggcgcgacgtg
atgatggcgctccacgccggcaatcccggcaagccccccgccatgcccgagggggtcgag
gcaaagcagatcgcgctccccggcacgcgcgaaccgccgcgccgcgaatatttcatccgc
ggcaccggccaggccgaaatggcggccgcccccgccgccgcgcggcgcccgcgcatcacc
agcccggtcagcggcagcgtctatgcgctcgaccccgacatcccgatcgaccgccagcgg
ctcgcggtcgcggtcagcggcgaggttgcgggctatcgcctgctcctcgacaagaccccg
ctcggcgacgccgatgcgggccagcagatcctgccgcgccccggcgcgcacatgctgacg
ctcgtcgatcccggcggccgcatggtcgaccgcgtccgcttcacggtgcgctga
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