Sphingopyxis sp. YF1: EAO27_17375
Help
Entry
EAO27_17375 CDS
T10727
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf00230
Purine metabolism
spyf01100
Metabolic pathways
spyf01110
Biosynthesis of secondary metabolites
Module
spyf_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
EAO27_17375 (purD)
Enzymes [BR:
spyf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
EAO27_17375 (purD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_5
RimK
ATP-grasp_2
Dala_Dala_lig_C
ATPgrasp_ST
ATP-grasp_4
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
UNU44279
LinkDB
All DBs
Position
3666762..3668039
Genome browser
AA seq
425 aa
AA seq
DB search
MNILLIGSGGREHALAWQLAQSPSCAKLYAAPGNPGIELYAECVSIAVDDLDGLIAFVRA
HGIDFVVVGPEAPLVAGLADRLGEIGIPAFGPSAAAARLEGSKGFTKDLCARAGIPTAAY
VRCTSADEAHAVLEGFSIPVVIKADGLAAGKGVIIAETREDAEAAIADMFDGAFGGAGAE
VVIEEFMTGEEASFFALSDGSDVIAFGSAQDHKRVGDGDTGPNTGGMGAYSPAPVLTPDL
EAAVMDRIIRPTVATLAAEGTPYVGVLFAGLMLTGEGPKLIEYNCRFGDPECQVLMMRFR
GDFAALLHAAATAALAAAEPPAFAANYALTVVMAANGYPGTPEKGGAIRRIADAEAGGVR
VFHAGTARTNGAIVAAGGRVLNVTATGKSVTEAQARAYAAVDRLDFASGFCRRDIGWREV
AREAL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcctgctcatcgggtcggggggccgcgaacatgcgctggcgtggcaactggca
caatcgccgagttgcgccaagctctatgccgcgccgggcaacccggggatcgagctttac
gccgaatgcgtctcgatcgcggtcgacgatctcgacgggctgatcgccttcgtccgcgcg
cacggcatcgacttcgtcgtcgtcggccccgaagcgccgctcgtcgcgggcctcgccgac
cgcctcggagagatcggcattcccgccttcggcccctcggccgcggccgcgcggctcgaa
gggtcgaagggcttcaccaaggatttatgcgcgcgcgcgggcatccccaccgccgcctat
gtccgctgcaccagcgccgacgaagcgcatgccgtgctcgaaggcttttcgatccccgtc
gtgatcaaggccgacgggctcgccgcgggcaagggcgtgattatcgccgagacgcgcgaa
gacgccgaggcggcgatcgccgacatgttcgacggcgccttcggcggcgccggcgccgaa
gtggtgatcgaggaatttatgaccggcgaggaggcgagcttcttcgcgctctccgacggc
agcgacgtcatcgcgttcggcagcgcgcaggaccacaagcgcgtcggcgacggcgacacc
ggtcccaacaccgggggcatgggcgcctacagccccgcgcccgtgctcacccccgacctc
gaagccgccgtcatggaccgcatcatccgcccgacggtcgccaccctcgccgccgagggc
acgccctacgtgggcgtgctgttcgcggggctgatgctcaccggcgaaggcccgaagctg
atcgaatataactgccgcttcggcgatcccgaatgccaggtgctgatgatgcgcttccgg
ggcgatttcgccgcgttgctgcacgccgcggcgaccgcggcgctcgccgctgccgagccc
cccgccttcgccgccaactatgcgctcaccgtggtgatggcggccaacggctatccgggc
acccccgaaaagggcggcgcgatccgccgcatcgccgacgccgaagccggcggagtgcgc
gtctttcacgccggcaccgcgcgcaccaacggcgcgatcgtcgccgcgggcgggcgcgtg
ctcaacgtcaccgcgacgggcaagagcgtgaccgaagcacaggcgcgcgcctatgccgcg
gtcgacaggctcgatttcgccagcggtttctgccgccgcgacatcggctggcgcgaagtc
gcgcgcgaagcgctctga
DBGET
integrated database retrieval system
