Sphingopyxis sp. YF1: EAO27_17490
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Entry
EAO27_17490 CDS
T10727
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf03030
DNA replication
spyf03430
Mismatch repair
spyf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAO27_17490 (holA)
03430 Mismatch repair
EAO27_17490 (holA)
03440 Homologous recombination
EAO27_17490 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spyf03032
]
EAO27_17490 (holA)
03400 DNA repair and recombination proteins [BR:
spyf03400
]
EAO27_17490 (holA)
Enzymes [BR:
spyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EAO27_17490 (holA)
DNA replication proteins [BR:
spyf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EAO27_17490 (holA)
DNA repair and recombination proteins [BR:
spyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EAO27_17490 (holA)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
UNU44298
LinkDB
All DBs
Position
complement(3690339..3691370)
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AA seq
343 aa
AA seq
DB search
MKTVKPGDLERQTRLDPAVRFVLLTGPDDATMETLGARLIGLAGREAERADFSNSQLSQD
PSLLAVEAASMSLFASARVIRLEIAGSGDDCLAAVEALLVADTAVNPVIATGASITAKSK
LVKLVEGSPHAVAAICYQPDRRALIGIAISAADEQGLRLGNAEAQSLIDLVSGDQTLMRR
ELEKVALYLDAGVDRRRQVSAADIAALGAATHEEDVSECINVALGGKVRELPAMLAQAAA
VGVAEIRLIRALAIRAMQLARLRAEVDAGAHPASVVAAKSSGVFWKERDAVTAQLHIWDS
VRIARLMTRLLDCERALKASGTAGAVLFRKLITDIAHQAARAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaccgtcaagcctggcgatctcgagcgccagacacggctcgaccccgcggtccgt
ttcgtccttctcaccggtcccgacgatgcgacgatggaaacgcttggcgcacggttgatc
ggtcttgcgggcagggaggccgagcgagccgatttctcgaatagtcaattgtcgcaggac
ccctcgctacttgctgtggaggcggcgtcgatgtcgcttttcgccagtgcgcgcgtaatc
cggctcgaaatcgctggcagcggtgacgattgccttgctgcggtcgaggccctgcttgtc
gccgacactgcggtcaacccggtgattgcaaccggcgcttcgattactgccaagtcgaag
ctcgtcaaactcgttgaaggctcgccgcacgccgtggctgccatttgttatcaacccgat
cgtcgcgcgctcatcggcattgcgatcagcgcggcggacgagcagggactgaggctcggt
aacgcggaagctcaatcgctgatcgatctcgtctcgggcgaccagacactgatgcggcgc
gagcttgagaaggttgcgctctatctcgatgcgggggtggatcggcggcggcaggtgagc
gctgccgacattgcagccttaggcgccgcgacgcacgaggaggatgtcagcgaatgcatc
aacgtcgcgctgggcggcaaggtgcgcgagctgccggcgatgctcgcgcaggcggcggcg
gtcggggtcgccgaaatccggctgatccgcgcgctcgcgatccgcgcgatgcaactcgcg
cggctgcgcgccgaggtcgacgccggcgcgcaccccgcgagcgtcgtcgcggcgaagagc
agcggggtgttctggaaggaacgcgacgcggtgaccgcgcagttgcatatctgggattcg
gtgcgcatcgcgcgcctgatgacgcgcttgctcgactgcgaacgcgcgctcaaggcatcg
ggcaccgcgggcgcggtcctgttccgcaagctgatcaccgacatcgcgcaccaggcggcg
cgcgcgcgctga
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