Sphingopyxis sp. YF1: EAO27_17620
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Entry
EAO27_17620 CDS
T10727
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EAO27_17620 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spyf03400
]
EAO27_17620 (mutS)
DNA repair and recombination proteins [BR:
spyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EAO27_17620 (mutS)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
UNU44322
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Position
complement(3719391..3722051)
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AA seq
886 aa
AA seq
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MSASVALSAAKPSSPAATPMMAQYWSLKEKAGDCMLFYRMGDFFELFFDDAKAAAATLDI
ALTSRGEHDGQPVPMCGVPVHSAESYLARLIRAGHRVAIAEQVETPAEAKARGGSKALVA
RDIVRFVTAGTLTEEALLEGRSANRLAALAEVGSEGLVAIAAADISTGRFEVVAVPREAV
DAELARLAPSELLVGEGAETLPAWGGVRQLVRRPQGDFASGPGQRRLEALFGVQTLDGFG
QFSRGELAAMGAVAAYLDHVGTGGTVFLQPPVRHLASGRMAIDAATRESLELVRTMAGAR
DGSLLGTIDRTVTAAGARLLADDLASPLTDRDAILDRLDLVDALARDALWRGDLRATLRA
LPDAGRALGRLVAGRGGPRDLAQLRDALAGARMLRERLGRRPDLPPLLARLLPGLDGHGA
LVDELTRALIETPPVDAAQGGYVAEGYDHALDALRETARDGRKAIAALEADYRDRTGIAS
LKIRHNGVLGYHVEVPAKHADALMAPESGFTHRQTLAGVVRFNSSDLHDAASRVTQAGVH
AIAAEAAHLEALTAAAVARREAIAASCDVLARLDVAAALADHAMSHNWCRPDLVDGPCLD
VTGGRHPVVEAALAKSGERFVPNDVALSQADRLWLVTGPNMGGKSTFLRQNALIVVLAQA
GGFVPASAVKLGLVDRLFSRVGASDNLARGRSTFMVEMVETAAILAQATPNSFVILDEVG
RGTSTYDGLALAWAVVEAVHEVNQCRCLFATHYHELTRLAESLGALSLHHVRAREWQGDL
VLLHELADGPADRSYGLAVARLAGVSPKVVKRAEAVLAKLEAGREKTGGLAAGLDDLPLF
AATLAAEPEAAKDALRETLAGIDPDALTPREALDALYRLKQVEAGA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttccgtcgctctctccgccgcaaaaccctcgtcccccgccgcgacgcccatg
atggcgcaatattggtcgctcaaggaaaaggcgggcgactgcatgcttttttaccgcatg
ggcgactttttcgagctgttcttcgacgacgcgaaagcggcggcagcgacgctcgacatc
gcgctcacctcgcgcggcgaacatgacgggcagccggtgccgatgtgcggggtgcccgta
cattcggccgaatcctatctcgcgcggctgatccgggcggggcaccgcgtcgcgatcgcc
gaacaggtcgaaacccccgctgaagcgaaggcgcgcggcggatcgaaggcgctcgtcgcg
cgcgatatcgtgcgcttcgtcaccgcgggcacgctgaccgaagaggcgctgctcgaaggg
cgcagcgccaatcgcctcgccgcgcttgccgaggtcggcagcgagggactggtcgcgatc
gccgcggccgatatttcgaccggacgcttcgaggtggtcgcggtcccgcgcgaggcggtc
gacgccgaacttgcgcggctggctccgtctgaactgctcgtcggcgaaggggccgagacg
cttcctgcctggggcggcgtgcgccagcttgtccggcgcccacagggcgattttgcgagc
gggcccgggcaaaggcggcttgaggcgctcttcggggtccagacgctcgacggcttcggg
caattctcgcgcggcgaactcgccgcgatgggggcggtcgccgcctatctcgatcatgtc
ggaaccggcgggacggttttccttcagccgccggtgcgccatctggcttcggggcggatg
gcgatcgacgccgcgacgcgcgaaagcctcgaactcgtccgcaccatggcgggtgcgcgc
gacggcagcctgctcggtacgatcgaccgcacggtgaccgcggcgggcgcgcggctgctc
gccgacgatctcgccagcccgcttaccgaccgggacgcgatccttgatcggctcgacctc
gtcgacgcccttgcgcgcgatgcgctgtggcgcggcgacctgcgcgcgaccctgcgcgcg
ctgcccgacgccgggcgggcgctcggacggctcgtcgctggccgcggcggaccgcgcgat
ctcgcgcagcttcgcgatgcgctcgcgggcgcgcggatgttgcgcgaacggctcggtcgc
cgccccgacctgccgccgctgctcgcgcgcctgctgccgggactcgacggtcacggcgcg
ctcgtcgacgaactgacgcgcgcgctcatcgaaacgccgccggtcgacgccgcgcagggc
ggctatgtcgccgagggttacgaccatgcgctcgatgcgctgcgcgaaaccgcgcgcgac
gggcgcaaggcgattgccgccctggaagccgactatcgcgaccgtaccggcatcgcctcg
ctcaagattcgccacaatggtgtgctcggctatcatgtcgaggtgcccgcgaagcatgcc
gacgcgttgatggcgccagaatcgggcttcacccaccgccagaccctcgcgggcgtcgtg
cgcttcaattcctctgacctccacgacgccgcgagccgggtgacgcaggcgggcgtccac
gcgatcgctgccgaggccgcgcatcttgaggcgcttaccgccgccgctgtcgcgcggcgc
gaggcgatcgccgcttcgtgtgacgtgctcgcgcggctcgacgtcgccgctgcgctcgcc
gaccatgcgatgagccacaattggtgccgccccgatcttgtcgacggcccctgtcttgac
gtgaccggcggccgtcatccggtggtcgaggcggcgctggcaaaatcgggcgaacgcttc
gtgccgaacgatgttgcgctgtcgcaggctgaccggctctggctggtcacgggtccgaac
atgggcggtaaatcgaccttcctgcgccagaatgcgctgatcgtcgtgctcgcgcaggcg
ggcggcttcgtgcccgcctcggcggtgaagctcgggcttgtcgaccgcctcttcagccgt
gtcggcgcatccgacaatctcgcgcgcgggcgctcgaccttcatggttgaaatggtcgaa
accgctgcgatcctcgcgcaggccaccccgaacagcttcgtcatcctcgacgaggtcggg
cgcggcacctcgacatacgacggtctcgcgctcgcctgggcggtggtcgaggcggtgcac
gaggtgaaccagtgccgctgcctcttcgcgacgcactatcatgaactcacgcgcctcgcc
gaaagcctgggcgcgctttcgctccaccatgtccgcgcgcgcgagtggcagggcgatctg
gtgctccttcacgaactggccgacggtcccgccgaccgcagctacggcctcgccgtcgcg
cgtctcgcgggcgtgtcgcccaaggtggtcaagcgcgccgaagcggtgctcgccaagctc
gaggccggacgcgaaaagaccggcgggctcgcggcggggctcgacgacctgccgctcttc
gccgcgacgctcgccgccgaacccgaggcggcgaaggacgcgctgcgcgagacactcgca
ggcatcgaccccgacgcgctgaccccgcgcgaggcgctcgacgcgctctaccgcctcaag
caggtcgaggccggggcatga
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