Sphingopyxis sp. YF1: EAO27_18250
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Entry
EAO27_18250 CDS
T10727
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
spyf Sphingopyxis sp. YF1
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spyf02000
]
EAO27_18250
Transporters [BR:
spyf02000
]
Other transporters
Pores ion channels [TC:
1
]
EAO27_18250
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF7803
Motif
Other DBs
NCBI-ProteinID:
UNU45231
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Position
complement(3833295..3835220)
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AA seq
641 aa
AA seq
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MKYGPSIIALAAATPALAQTADTPADPRPAGDIIVTASRSGDGVPAGRLGASVTVIDGAA
LDRRQTRFVSDILRDVPGLAISRTGASGSLTQVRVRGSEANHVLVLVDGIEVADPFQGEY
DLGGLLADPAARIEVLRGQQSSLYGSDAIGGVIHYITLSGREAPGYSARIEGGSFGTIAG
SARAAGASETFDYAVSGSYYGTKGYATARGGTRDVGSENAGATAKFGWTPAENFRLGGVL
RYSYSDADNNDSEYDTASPRFGYTIDSPGVHVTNESFYGLLSAELTALDGRWVTALSGQF
ADTTRKGLTSFGLSYGDKGRRYKGSLTSSLRFGNDAVQHRLTGAVDVEREDFRSLTPFSF
QGRRHTDNIGLVGQYELVAGELSLGGSLRHDDNDRFDDSTTWRVQGSYRLPTGTRLRGAY
GTGVKNPGYFELFGYVDGRYIGNPNLRPEKSEGWEGGIEQSFGASDWATLGATWFDAVLT
DEIFTTYPPPSFEATPANRTTKSKQHGIEVFASARPIPELAFDLAYTWVASKEDGVREIR
RPRHVASVNTTLFSADRRFSGTLTLRYNGQQIDAAYTDPSYVPVIVSLKDYVLMNLGAEY
RVRPGVTLFGRVENILDADYEEVFSTVGAGRSAYAGVRLSF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
ctgaaatacggtccttccatcatcgcgctggcggcggcaacgcccgcgctggcgcagacc
gccgacacgcccgccgacccgcgccccgccggcgacatcatcgtcaccgcgtcgcgctcg
ggcgacggcgtgcccgccggacggctcggcgcctcggtcaccgtcatcgatggcgcagca
ctggaccggcgccagacacgcttcgtgtccgacatattgcgcgacgtgcccggactcgcg
atcagccgcaccggcgcgagcggcagcctgacgcaggtgcgcgtgcgcggcagcgaggcg
aaccacgtgctcgtcctcgtcgacgggatcgaggtcgccgacccctttcagggcgaatat
gatctgggtgggctgctcgccgatccggcggcgcggatcgaggtgctgcgcgggcagcag
agttcgctctacggttccgacgcgatcggcggggtgatccactatatcaccctgtcgggg
cgcgaggcgccgggatatagcgcgcggatcgagggcggatcgttcggcacgatcgcgggc
agcgcgcgcgccgctggggcgtcggagacgttcgactatgccgtgtcgggcagctattac
gggacgaagggctatgcgaccgcgcgcggcggcacgcgcgacgtcggctccgaaaacgcc
ggcgcgaccgccaaattcggctggacgccggccgagaatttcaggctcggcggggtgctg
cgctacagctacagcgacgccgacaacaacgacagcgagtatgacaccgcaagcccgcgt
tttggctacacgatcgacagccccggcgtgcacgtcaccaacgaatccttctacggcctg
ctctcggccgaactgaccgcgctcgacgggcgctgggtcaccgccttgtcggggcagttc
gccgacacgacgcgcaaggggctgacatccttcgggctgagctatggcgacaagggccgg
cgctacaagggatcgctgacctcgagcctgcgtttcggaaacgacgcggtgcagcacagg
ctgaccggcgcggtcgatgtcgaacgcgaggattttcgcagccttacccccttctccttc
cagggccggcgccacaccgacaatatcggtctcgtcggccaatatgagctggtcgcgggc
gagttgtcgctcggcgggtcgctgcgccacgacgataacgaccgcttcgacgacagcacg
acctggcgcgtgcagggcagctaccgcctgccaaccggcacccggctgcgtggcgcctat
ggcaccggggtcaagaatcccggctatttcgagctcttcggctatgtcgacggccgctac
atcggcaaccccaacctgcgccccgaaaaatccgagggctgggaaggcgggatcgagcag
agctttggcgccagcgactgggcgacgctcggcgcgacctggttcgatgcggtgctgacc
gacgagatcttcaccacctatccgccgcccagtttcgaggcgacccccgcgaaccggacg
acgaagagcaagcagcacgggatcgaggtcttcgcgagcgcgcggccgatccccgagctg
gcgtttgacctcgcctatacctgggtcgcatcgaaggaggacggcgtgcgcgagatacgg
cggccgcggcatgtcgcgagcgtcaacacgacgctgttcagcgccgaccggcgcttttcg
ggaacactgacgctgcgctacaacgggcagcagatcgacgccgcctataccgaccccagc
tatgtgccggtgatcgtgtcgctgaaggactatgtgctgatgaacctcggcgccgaatat
cgggtccgccccggcgtcacgctcttcggccgcgtcgaaaatatcctcgacgccgattat
gaggaggtgttcagcaccgtcggcgcgggtcgttcggcttatgccggcgtccggctgagc
ttctga
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