Sphingopyxis sp. YF1: EAO27_19330
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Entry
EAO27_19330 CDS
T10727
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spyf Sphingopyxis sp. YF1
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spyf02000
]
EAO27_19330
Transporters [BR:
spyf02000
]
Other transporters
Pores ion channels [TC:
1
]
EAO27_19330
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UNU44622
LinkDB
All DBs
Position
complement(4067747..4069933)
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AA seq
728 aa
AA seq
DB search
MRKLPFFLGAVLISTPAFAQEADSPSTEPEINDNAIVVTARKRDERIVDVPLSISALGAG
DIDAKASLRLLDLANSVPNLVNISNGNDSLSLIVVRGVASQSRVNAGFDSGVGVYVDGVV
QGKLYSFNQELFDTERVEFLRGPQGTLFGRNSIAGAISITTRKPEFEFGGDATVQLGSYD
ERRFSAFLTGPVAEDKLAISIGGFRTTRHGYITNVLDGQDIGNIDSVGGRIKALWRPNSD
VSVLLSADYTNEDQLAPVPQPISGYGAVTGTYKTNTNLPPIAKRELFGVSGQIDWSTSTD
LTLTSITAYRTASSLRNNDPDFGPLAVVDSQKKQDQWQFSQELRLAGKLGPQFSFVSGLY
YFKQEVDGYASSTFGNITNVPGFLRGLTGSTSGVVGSESFAGFVNADWEALPRLTLTLGA
RLTYENQTLDFRQQGFPFVAPTLPRETDAGSDTDFSPLVTLRYKLAPSVSIYGTVSRGYK
SGGWNLDNVTSFSITSFKQLRFNREQLTNYEVGLKGDVLNGDLGFAFSGFQQNYGDIQTA
KLVPVLGGGGALIAVVSNAASARIRGLEGEVKVRPFKPFTVVGTLGYADARFKDYRDTTA
GGAPLIFDGNRIPNSPELTASLTATLRVPVNDRLTLGGRAQYSYVDGFFQDRDNSAALRI
PSRDTVDMSIEAEIDKNFRLAFNVSNLFNNQVPVSVGPGGFGFPGVGANQNVQLSLPRMW
NVRASLKF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagttaccgttttttctcggtgctgttctgatcagcacgccagccttcgcgcag
gaggccgattcgccttcaaccgagccggagatcaacgacaacgccatcgtcgtaacagcc
cgcaagcgggatgagcgaattgtcgatgtgccgctttcgatcagcgctctcggagctggc
gatatcgatgcgaaagcatccctgcgactgctcgacctggccaactcggtcccgaatctt
gtcaacatcagcaatggcaacgattctctctcgctgatcgtcgtgcgcggggtcgccagt
cagtcgcgggtgaacgcgggattcgattccggtgtcggcgtctacgtcgacggggtagtt
caaggtaagctctacagcttcaaccaggaattgtttgacaccgagcgggttgaattcctg
cggggtccccaaggaacgcttttcggccgcaattcgattgccggcgcgatcagcattacc
acccgcaagcccgagttcgaattcggcggcgatgcaacagtgcaactcggcagttacgac
gaacgtcgattttctgccttcctgaccggacccgttgccgaagacaagcttgcaatcagc
atcggtggcttccggaccactcggcacggctatatcaccaacgtcctcgatgggcaggat
atcggcaacatcgattccgtcggcgggcggatcaaggccctatggcggccaaacagcgat
gtatcggtcttgctgtcagcagattatacgaacgaggaccagcttgctcctgtaccgcag
ccgattagcggatatggcgctgtcactggcacctacaagaccaacaccaaccttcccccg
attgcgaaacgcgagttattcggtgtttccggtcagatcgactggtcaacctcaactgac
ctgaccctgacttcgattaccgcctaccggaccgcctcctcgttgcgcaataatgatccc
gacttcggcccattggcagtcgtggacagccaaaaaaagcaggatcaatggcaattctcc
caggagttgcgccttgctggcaagctggggcctcaattttcctttgtcagcggcctttac
tatttcaagcaggaggttgacggttatgcctcgagcactttcggcaacattaccaacgtc
ccgggattcctgagggggctgaccggttctacgagcggggtggtaggatcggaatccttc
gcaggcttcgtcaatgctgattgggaggcgctaccgcgcctaacgctgacgctcggggca
cgactgacctatgagaatcagaccctcgacttccgtcagcaaggcttcccgttcgttgcg
cccaccctgccacgtgaaaccgatgctggttccgataccgatttctcgccccttgttacc
ttgcgctacaagcttgcgccgagcgtatcgatctacgggacggtgtcgcgcggatacaag
agcgggggctggaacctcgacaacgtaacgagcttctcgatcacctcgtttaaacagttg
cggttcaatcgcgagcagctgaccaactatgaagttggtttgaagggtgacgttctgaac
ggtgatctgggctttgcattctccggcttccagcaaaactatggcgacatccagaccgcg
aaacttgtgccagtactgggcggcggcggggcgctgatcgcggttgtctcgaatgctgcg
agcgcgagaatccgtgggctcgaaggggaagtcaaggttcgtcccttcaagccgttcacg
gttgtcggaacgctcggctacgctgacgcgcggttcaaggactaccgcgataccacggcc
ggcggcgccccgttgatcttcgacggcaaccgtattccgaattctcctgaactgacagcc
agcctcaccgccacattgcgagtgcctgtgaatgacaggctcaccttgggcgggcgcgcg
caatacagctatgtcgatggcttcttccaggatcgcgataacagcgccgcgttgcggatc
ccgtctcgcgacaccgtcgacatgtcgatcgaagccgagatcgacaaaaacttccggctg
gcgttcaatgtcagcaacctgttcaacaaccaggttccggtctctgtcggtccgggcggt
ttcggctttccgggtgtaggggcaaatcaaaacgttcagttgtccctgccgcggatgtgg
aatgttcgagcaagcttgaagttctag
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