Sphingopyxis sp. YF1: EAO27_19420
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Entry
EAO27_19420 CDS
T10727
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spyf Sphingopyxis sp. YF1
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spyf02000
]
EAO27_19420
Transporters [BR:
spyf02000
]
Other transporters
Pores ion channels [TC:
1
]
EAO27_19420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UNU44638
LinkDB
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Position
4090929..4093109
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AA seq
726 aa
AA seq
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MIRRSIAWATLVTLMVSAAPAALAQNTPAAADDAQDDKAPDEIVVTARKVTERLQDVPIA
ISAVSADKIAERDNVRVSELAAAVPNVTFSGGPLATITVRGVSSQSRYNPGFDSGIGVYI
DGVVQGKSYTFDSPLYDVERVEFLRGPQGTLFGKNAIGGAISIVTRNPSFTPTGQFELST
GSFNRFEAQGFISAPLSSSLAVSVGGFRVKRDGYVRNLIDNRRFANDDSYGGRAKILWKP
SDLVKLVLSADYLKEDNYGYVDEVSAGYGGPTGRYESNVDTPNLARRKTKGLALTADIET
GFGATLTSITSYRWAENQRTNDSDVGPLSIVVSESASKQTQFSQEVRLSGKLAERINYLI
GGYLFRQDTDNFAQSTFGPDSRFAPLRGQVGNTFGEADTEAVAAFASVDWELVDKLTATV
GIRYTDEAKRLNYQQIGFPLIGAPNLPQEFDRISATDVSPTFTLRYQPSRDIMVYGTASK
GFKSGGWNVDNITSPRITTFKALRFGDESLWNYELGIKAQFLDNRITFNADAFRQDYSNI
QTPQLTQVLGGGGAVVAIVTNAASARLQGLEAELTVRPTGILTVNGVLGYTDAKYSRYTD
GALNFSGNRLPGAPKWTGNLSATLRVPVSDDWSLGARGEYLYRSSTFGDRENSAARTTPS
YASINLSAGIYGKHFDLVGFVNNLADKQDVILISEGGFPAPLGVGLNTLVTRQLGRTWGL
RLAGRF
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtcgatcaattgcttgggcgaccctggtcactttgatggtctcagctgcgcct
gcagccctcgcgcagaatacgcccgcagcagcggacgatgcacaggacgacaaggcgcct
gatgaaatcgttgtcacggcccggaaggtcaccgagcgccttcaggatgtgccgatcgcg
atctcggcagtctcagccgacaagattgccgaacgtgacaatgtgcgggtctcggaactg
gcagctgctgttcccaacgtaacatttagcggtggtccacttgccactattaccgtgcgc
ggcgtctcgagccagtcacgctacaatcccggattcgacagcggaattggggtctacatc
gacggtgtggtacaagggaaaagctacacatttgactccccgctctatgacgtcgagcgg
gtcgagttccttcgcggaccgcaagggacactcttcggcaaaaatgcaattggcggagcg
atcagtatcgtcacgcgcaacccgagcttcacgcccaccggccaattcgaactttcaacc
ggcagcttcaaccgtttcgaagcacaggggtttatctcagcgccgctctccagcagtctt
gcggtaagtgtgggcggatttcgggttaaacgggatggctacgtccgtaacctgatcgac
aatcggcgcttcgcaaacgacgatagctacgggggccgtgcaaagatcctttggaaaccc
tccgatctggtcaagctcgttttgtcggccgactacctgaaagaggacaactacggctac
gtagatgaggtttctgccgggtatggcggaccgactggacgctatgaaagcaacgtcgac
acccctaatctcgcccggcgcaagaccaaaggactcgcgctaacagctgacattgaaact
ggcttcggggcgacccttacgtcaattacttcttatcgatgggccgaaaaccagagaacc
aatgattccgacgtcggcccactctcgatcgtcgtaagcgagtctgcgtccaagcagacc
cagttttcgcaagaggtgcgtttgtccggcaaacttgccgagcgtatcaattatttgatc
ggcggttatctcttccgccaggataccgataacttcgcacaaagtacgttcggtcctgac
agcagatttgcaccgctgagggggcaggtcggcaatacctttggcgaggctgacactgaa
gcagtggctgcgttcgcaagtgtggattgggaacttgtcgataagctgactgccactgtc
ggcattcgctacaccgacgaagccaagcgcctcaattatcagcagataggctttccgctg
atcggcgcccccaacctgccgcaggagtttgacaggatcagcgcgacagatgtttcgccc
acctttacgcttcgctaccagccgtcacgcgacatcatggtatatggcacggcttcgaag
ggcttcaagtcgggtggatggaacgtcgacaacatcacttcgccgcgcatcacgactttc
aaagccctgcgttttggtgacgagagcctttggaactatgaactgggtatcaaggcacag
ttcctcgacaatcgcatcacgttcaacgccgacgcctttcggcaggattattccaacatt
cagacgccgcagcttacccaagtcctcggcggtggcggtgctgtcgtagctatcgtgacc
aacgccgcatcggcccgactgcaggggttggaagcggaactgaccgtgcgaccgaccggc
attttgacggtgaatggagtacttggctacaccgatgcaaaatatagcaggtacaccgac
ggggcgctgaatttttccggaaaccggctgcccggggctcccaagtggactggcaacctg
tcggcgaccttgcgagtcccggttagcgacgactggtcgctgggcgcgcgcggcgaatat
ctctatcgctcgagtacgttcggcgatcgcgagaactcggcagctcgtacaacgccgtca
tatgcttctatcaacctctcggctggcatttacggcaagcatttcgacctcgtcggcttt
gtcaacaacctcgccgacaaacaggacgtaatcctgatttccgaaggtgggttcccggct
ccgcttggtgtcgggttgaacacgctggttaccaggcagctggggcgtacctggggctta
cggcttgctggccgtttctga
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