Sphingopyxis sp. YF1: EAO27_19925
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Entry
EAO27_19925 CDS
T10727
Name
(GenBank) PAS domain S-box protein
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EAO27_19925
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
spyf01001
]
EAO27_19925
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spyf02022
]
EAO27_19925
Enzymes [BR:
spyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
EAO27_19925
Protein kinases [BR:
spyf01001
]
Histidine kinases
LuxR family [OT]
EAO27_19925
Two-component system [BR:
spyf02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
EAO27_19925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
HATPase_c
PAS_4
PAS_8
PAS_3
HisKA
Diguanyl_cycl_sensor
DUF4118
HATPase_c_5
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
UNU45262
LinkDB
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Position
4203407..4205281
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AA seq
624 aa
AA seq
DB search
MMLVHRSFTVRLACALVLVAAAGLLRHGLEPWLGNALPFLLFAPAILAAAILAGPVAASI
AMLPALALGLYFAGYRGGDIQAFVEAAVFLLTAGGIIALAAGFERMRGRMRESDRRARRR
DAEAALVAEELNLLIDGAQGHAIYLLDAEGRVTIWNEGAERLKGWREEEVVGKDASIFYP
SDAIAAGKPEEDLAVAARDGRFETEDWRVRKDGSEYLADVSITALRNRDGGLRGFAKIVS
DITGRRAAEEALRSQESHLRSILSTVPDAMVVIDDEGLILSFSAAAERLFGYREAELLGV
NVSRLMPSPDRERHDAYIKRYLQTGEKRIIGIGRVVFAERKDGSTFPMELSIGEAAGDVH
PLFTGFIRDLTERQQTEARLESLQSELIHVSRVSAMGTMASTLAHELNQPLTAVANYVEA
VRDLLVDPDPADIPMIHDALDDTAKEALRAGHIVRRLRDFVARGEVEKTIEKLPLLINEA
AVLGLMGAREKGVEPRFDLDPYASPVLVDKVQIQQVLINLVRNAVEAMAASPVRQLTVTS
RPDQRGFVRVIVADTGPGVAPEVAEQLFTAFVSTKAEGMGLGLSICRTIVEANGGRIWME
AREGGGTEFHFTLVSAKAEDNDVG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggtgcaccgctctttcaccgtccggcttgcctgtgcgctggtgctcgtcgcg
gcggccgggctcctgcgtcatgggcttgagccctggctcggcaacgcgcttccctttctg
ttgtttgcgccggccattctggcggcggccattctcgccgggcctgtcgcggcttcgatc
gcgatgctgcctgcgctcgcgcttggactctatttcgcgggctatcgcggtggagatatc
caggcgttcgtcgaagcggcggtgtttctgctgacggccggcgggatcatcgccttggcg
gccggcttcgaacgaatgcggggccggatgcgcgagagcgatcggcgcgcccggcgccgc
gacgcggaagccgcgctcgtcgccgaagagctcaatcttttgatcgacggcgcgcagggg
catgccatctatctgctcgatgccgaagggcgggtgacgatctggaacgagggagccgag
cgcctcaagggctggcgcgaggaggaagtggtcgggaaggatgcctcgatcttctatccg
tccgatgcgattgcggccggcaagccggaagaagatctggctgtcgccgcgcgcgacggg
cggttcgagaccgaggactggcgcgtccgcaaggacggatcggagtatctcgccgacgtc
tcgatcacggcgctcaggaatcgcgatggtggcttgcgcggcttcgccaagatcgtctcg
gatatcaccgggcgtcgtgcggctgaagaggccctccgatcgcaggagagtcacctccgt
tcgatcctctcgacggtgcccgacgcgatggtcgtgatcgacgacgaggggttgatcctg
tcgttcagtgcggccgcggagcgcctgttcggctatagggaggcggaactgcttggggtc
aatgtaagccgcctcatgccctcgccggaccgcgagcggcacgatgcctatatcaagcgc
tatctgcagaccggagagaagcggatcatcggcatcggacgggtggtgttcgccgagcga
aaggacggatcgacctttccgatggagctgtcgatcggcgaggcggcaggcgatgtgcat
ccgctgttcaccggtttcatccgcgatctgaccgaacggcagcagaccgaagcgaggctc
gaatcgctccagtccgaactcatccacgtctcgcgcgtcagtgcgatggggacgatggcc
tcgacgcttgcgcacgaactcaaccagccgctcactgcggtcgccaactatgtcgaggcg
gtgcgcgatctgcttgtcgatcctgatccggccgacattccgatgatccatgatgcgctc
gacgacacggcgaaggaagcgctgcgcgccggccatatcgtacggcgcctgcgcgatttc
gtcgcccgcggcgaagtcgagaagacgatcgagaaactgccgctgctgatcaacgaggcg
gccgtcctgggcctgatgggcgcgcgcgagaagggggtagaaccgcgcttcgacctcgat
ccctatgcctccccggtcctggtcgacaaggttcagattcagcaggtgctgatcaacctt
gtccgcaatgcggtcgaggcgatggccgccagtccggtgcgccagcttaccgttaccagt
cgccccgaccagcgtggcttcgtgcgcgttatcgtggccgacacggggccgggggttgcg
cccgaggtggccgagcagctgtttacggccttcgtcagcaccaaagccgaaggcatgggc
ctcggcctgtcgatctgccggacgatcgtcgaggcgaacggcggccggatctggatggaa
gcgcgcgaaggcggcggtaccgaatttcatttcaccctggtgagcgcgaaagcggaggac
aatgatgtcggatag
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