Sphingobium sp. YG1: YGS_C1P0284
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Entry
YGS_C1P0284 CDS
T05858
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00300
Lysine biosynthesis
spyg00470
D-Amino acid metabolism
spyg01100
Metabolic pathways
spyg01110
Biosynthesis of secondary metabolites
spyg01120
Microbial metabolism in diverse environments
spyg01230
Biosynthesis of amino acids
Module
spyg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YGS_C1P0284
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YGS_C1P0284
Enzymes [BR:
spyg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
YGS_C1P0284
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BBC99028
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Position
1:complement(299868..300650)
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AA seq
260 aa
AA seq
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MHGLGNDFVVIDARAGDVAMTQARARAIADRHAGIGCDQLILIGESDDADVSMQIFNADG
SEVEACGNATRCVPLFVGRDVLIRTKAGLLDAKSVDGGASVDMGAPRFDWDAIPLAYPMD
TLTMGASWEDLPAPAAVNVGNPHVIFFVDDLDTVNFDRLGPLIEHDPLFPARVNVNFAQV
VGDNHIRLVVWERGAGLTRACGTGACATAVAAIRRKLMAGPVTVSLPGGDLMIDWAPGGT
IRMTGPATHVFDGEADWSRF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggctgggcaatgatttcgtcgtgatcgacgcgcgcgcaggcgatgtcgcgatg
acgcaggcgcgcgcccgcgccattgccgatcgccatgccgggatcggctgtgaccagctg
atcctgatcggcgagagcgatgacgccgacgtgtcgatgcaaatcttcaacgccgatggc
agcgaagtggaagcctgcggcaacgcgacccgctgcgtgcccctgttcgtcggccgcgac
gtgctgatccgtaccaaggccggcctgctcgatgccaagtcggtcgatggcggcgccagc
gtcgatatgggtgcgccccgcttcgactgggacgccatcccgctcgcctatcccatggac
acgctgaccatgggcgccagttgggaagacctgcccgcccccgctgcggtcaatgtcggc
aacccgcatgtcatcttcttcgtggacgatctcgacactgtgaacttcgatcggctcggc
ccgctgatcgagcatgatccgctgttcccggcgcgcgtgaacgtcaatttcgcgcaggtc
gttggcgacaatcatatccgcttggtcgtgtgggaacgcggcgccggcctgacccgcgcc
tgcggtaccggcgcctgcgccaccgccgtcgccgcgatccgccggaaactcatggccggc
cccgtcaccgtcagcctgcccggtggcgacctgatgatcgactgggcgcccggcggtacg
atccgcatgaccggccccgccacccatgtcttcgacggcgaggccgactggtcgcgtttc
tga
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