KEGG   Sphingobium sp. YG1: YGS_C1P0284
Entry
YGS_C1P0284       CDS       T05858                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
spyg  Sphingobium sp. YG1
Pathway
spyg00300  Lysine biosynthesis
spyg00470  D-Amino acid metabolism
spyg01100  Metabolic pathways
spyg01110  Biosynthesis of secondary metabolites
spyg01120  Microbial metabolism in diverse environments
spyg01230  Biosynthesis of amino acids
Module
spyg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:spyg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    YGS_C1P0284
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    YGS_C1P0284
Enzymes [BR:spyg01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     YGS_C1P0284
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: BBC99028
LinkDB
Position
1:complement(299868..300650)
AA seq 260 aa
MHGLGNDFVVIDARAGDVAMTQARARAIADRHAGIGCDQLILIGESDDADVSMQIFNADG
SEVEACGNATRCVPLFVGRDVLIRTKAGLLDAKSVDGGASVDMGAPRFDWDAIPLAYPMD
TLTMGASWEDLPAPAAVNVGNPHVIFFVDDLDTVNFDRLGPLIEHDPLFPARVNVNFAQV
VGDNHIRLVVWERGAGLTRACGTGACATAVAAIRRKLMAGPVTVSLPGGDLMIDWAPGGT
IRMTGPATHVFDGEADWSRF
NT seq 783 nt   +upstreamnt  +downstreamnt
atgcacgggctgggcaatgatttcgtcgtgatcgacgcgcgcgcaggcgatgtcgcgatg
acgcaggcgcgcgcccgcgccattgccgatcgccatgccgggatcggctgtgaccagctg
atcctgatcggcgagagcgatgacgccgacgtgtcgatgcaaatcttcaacgccgatggc
agcgaagtggaagcctgcggcaacgcgacccgctgcgtgcccctgttcgtcggccgcgac
gtgctgatccgtaccaaggccggcctgctcgatgccaagtcggtcgatggcggcgccagc
gtcgatatgggtgcgccccgcttcgactgggacgccatcccgctcgcctatcccatggac
acgctgaccatgggcgccagttgggaagacctgcccgcccccgctgcggtcaatgtcggc
aacccgcatgtcatcttcttcgtggacgatctcgacactgtgaacttcgatcggctcggc
ccgctgatcgagcatgatccgctgttcccggcgcgcgtgaacgtcaatttcgcgcaggtc
gttggcgacaatcatatccgcttggtcgtgtgggaacgcggcgccggcctgacccgcgcc
tgcggtaccggcgcctgcgccaccgccgtcgccgcgatccgccggaaactcatggccggc
cccgtcaccgtcagcctgcccggtggcgacctgatgatcgactgggcgcccggcggtacg
atccgcatgaccggccccgccacccatgtcttcgacggcgaggccgactggtcgcgtttc
tga

DBGET integrated database retrieval system