Sphingobium sp. YG1: YGS_C1P0425
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Entry
YGS_C1P0425 CDS
T05858
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00071
Fatty acid degradation
spyg00280
Valine, leucine and isoleucine degradation
spyg00310
Lysine degradation
spyg00362
Benzoate degradation
spyg00380
Tryptophan metabolism
spyg00410
beta-Alanine metabolism
spyg00640
Propanoate metabolism
spyg00650
Butanoate metabolism
spyg00907
Pinene, camphor and geraniol degradation
spyg00930
Caprolactam degradation
spyg01100
Metabolic pathways
spyg01110
Biosynthesis of secondary metabolites
spyg01120
Microbial metabolism in diverse environments
spyg01200
Carbon metabolism
spyg01212
Fatty acid metabolism
Module
spyg_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
YGS_C1P0425
00650 Butanoate metabolism
YGS_C1P0425
09103 Lipid metabolism
00071 Fatty acid degradation
YGS_C1P0425
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
YGS_C1P0425
00310 Lysine degradation
YGS_C1P0425
00380 Tryptophan metabolism
YGS_C1P0425
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
YGS_C1P0425
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
YGS_C1P0425
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
YGS_C1P0425
00930 Caprolactam degradation
YGS_C1P0425
Enzymes [BR:
spyg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
YGS_C1P0425
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
YGS_C1P0425
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
YGS_C1P0425
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
F420_oxidored
DAO
Sacchrp_dh_NADP
Pyr_redox_2
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_8
LSDAT_euk
UDPG_MGDP_dh_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
BBC99169
UniProt:
A0A2Z6AB39
LinkDB
All DBs
Position
1:complement(427920..430097)
Genome browser
AA seq
725 aa
AA seq
DB search
MNTITFDIDADGIATLTIDVPGQSMNVIGPDFLADMDAAITRIASEEGIKGAVIASGKGS
GFMAGMDLKYFGATLATSDGERPAPSAIFDKLFVLNALFRRLETSGKPIACAIEGTCVGG
GFELALACHRRFVGDSSKTQLGLPEILIGLFPGGGGSQRLPRLIGVQAALMYMLQGKLFR
PAEAAMLKAVDQVVPQGTAVEAARAWVKANPTANTQPWDVKGFKVPGGAGGFNPAFVQTM
AGALPMTLKQTQRNMNAPIALLSAVYEGITLPMDRAIRIESKYFAKVAADPQASNMIRTL
FVNKQAAERGARRPKDQPKAATTKLAMLGAGMMGAGIATVAAQAGIEVVLFDRDLAYAEK
GKAHVEAVLKKRLGKGMTPEKLEATLARVTPTTDYAALAGADFVIEAVFEDVSIKAEVTK
QVEAVLGADTIFGSNTSTLPITKLAQAWTRPENFIGVHFFSPVEKMPLVEIILGEKTGPA
AIAKALDFVAQIKKTPIVVHDSRGFYTSRSFGTYVQEGAELVGEGVNPALIENAGKQLGM
PTGPLAVSDEVSIELGWKIISAAKKELGDAYVPQGSDDIMVKMVEAGRLGRKNGKGWYDY
PEGAKKHLSPALGEMFPRAAEQPDVEAVKERLLYRQLIECARCFEEGVLETPEDGDIGAI
FGWGFAPYTGGPFSHMDTVGIAHVVAVLDRLAAEHGPRFAPTQQLRDMAASGGLFYRPAP
IQAAA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatcacattcgacatcgacgccgacggcatcgccacgctgaccatcgacgtg
cccggccagtcgatgaacgtcatcggcccggacttcctggcggacatggatgccgcgatc
acgcgcatcgcgtcggaagagggcatcaagggcgcggtcatcgcgtcgggcaagggcagc
ggcttcatggccggcatggacctgaaatatttcggcgcgacgctggcgaccagcgatggg
gaacgccctgccccctccgcgatctttgacaagctgttcgtgctgaacgctttgttccgt
cgcctggaaaccagcggcaagccgatcgcctgcgccatagaaggcacctgcgtcggtggc
gggttcgaactggcgctggcctgccatcgccgtttcgtcggcgacagcagcaagacgcag
ttgggcctgcccgaaatcctgatcggcctcttccccggcggtggcgggtcgcagcgcctg
ccgcgcctgatcggcgtgcaggccgcgctgatgtacatgcttcagggcaagctgttccgc
ccggccgaagcggcgatgctgaaggcggtggatcaggtcgtgccgcagggcacggcggtc
gaagctgcgcgtgcatgggtgaaggccaacccgaccgccaacacccagccctgggacgtc
aagggtttcaaggttccgggcggcgcgggcggcttcaaccccgccttcgtccagaccatg
gccggcgccctgccgatgacgctgaaacagacgcagcgcaacatgaacgcgccgatcgct
ttgctgtcggccgtctatgaaggcatcaccttgccgatggaccgggcgatccggatcgaa
agcaaatatttcgccaaggtcgccgccgatccgcaggcatcgaacatgatccgcaccctc
ttcgtcaacaagcaggcggccgaacgcggtgcgcgccgccccaaggatcagcccaaggca
gcgacgaccaagctggccatgctgggcgcgggcatgatgggcgctggcatcgccaccgtc
gcggcgcaggcggggatcgaagtcgtcctgttcgaccgcgacctggcctatgcggaaaag
ggcaaggcccatgtcgaggcggttttgaagaagcgcctgggcaagggcatgacgcccgaa
aagctggaagccacgctggcccgcgtgacccccaccaccgactatgcggcgctggccggc
gcggatttcgtgatcgaagcggtgttcgaggatgtgagcatcaaggcggaagtgaccaag
caggtcgaagccgtgctgggcgccgacaccatcttcggctccaacacctccactttgccg
atcaccaaattggcgcaggcctggaccaggccggagaatttcatcggcgtccacttcttc
tcgccagtcgagaagatgccgctggtggaaatcatcctgggcgaaaagaccggcccggcc
gccattgccaaagcgctagatttcgtcgcccagatcaagaagacgccgatcgtcgtgcat
gacagccgcggcttctacacctcgcgcagcttcggcacctatgtgcaggaaggtgcggag
ctggtcggcgaaggcgtcaacccggcgctcatcgaaaatgccggcaagcagctggggatg
cccaccggccctctggccgtcagcgacgaagtatcgatcgagctgggctggaagatcata
agcgcagccaagaaggaactgggcgacgcctatgtgccccaggggtcggacgacatcatg
gtcaagatggtcgaggccggacgtctgggccgcaagaatggcaagggctggtacgattat
cccgaaggcgcgaaaaagcatctgtcgccggcactgggcgagatgttcccgcgcgcggcc
gaacagcccgatgtcgaggcggtgaaagaacgcctcctctatcgccagctgatcgaatgc
gcccgctgtttcgaggaaggcgtgctggaaacgccggaagatggcgacatcggcgcgatc
ttcggctggggttttgcgccttataccggggggccattcagccatatggacacggtcggg
atcgcccacgtcgtggccgtgctggaccgtctggccgccgagcatggcccgcgctttgcg
cccacccagcagttgcgcgacatggcggcgagcggcgggctattttatcggccggcaccc
atacaggctgccgcataa
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