Sphingobium sp. YG1: YGS_C1P0518
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Entry
YGS_C1P0518 CDS
T05858
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
YGS_C1P0518
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
AAA_16
RecA
nSTAND3
AAA_22
DnaB_C
AAA_14
IstB_IS21
GvpD_P-loop
NPHP3_N
NACHT
AAA_24
SLFN-g3_helicase
PAXNEB
AAA_29
MEDS
AAA_30
AAA_18
AAA_19
AAA_5
AAA
AAA_33
cobW
Zeta_toxin
Viral_helicase1
DEAD
ATPase_2
ResIII
NTPase_1
AAA_7
DAP3
AAA_23
Zot
PhoH
T2SSE
DUF562
Motif
Other DBs
NCBI-ProteinID:
BBC99262
UniProt:
A0A2Z6ABB2
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Position
1:complement(526565..528058)
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AA seq
497 aa
AA seq
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MNLKIISTGNVGLDKILGGGIPASRLYLLEGAPGSGKTTLALQFLREGIRKGERVLYITL
SETREELGAVAASHDWTLDGFDVFELESADDVFGNGREQSIIHPWEMELGETIRLIQDEV
ERVRPTRVVFDSLSEMRLLAQDPLRYRRQVLALKQFFSGRDSTVILVDDMTGSADARDAH
LHSLCHGVVTLERLTLDFGAARRRMQVQKLRGIDFTAGYHDMMIRKGGVDIFPRLIAADH
HSDFTGDMVQSEVVELDALLGGGPMRGTSTLITGPAGSGKTTIALQYLYAACERGEPCTL
FEFDERVGTLLTRSNAFGLDITRHVDQGCLTIQQIDPAEISPGEFAARVRHEVEERGVRM
IVIDSLNGYMAAMPQEQQLLLQMHELLSYLSQRGVVTFLINPQHGLVGTMSTNLNISYVA
DTVVLLRFFEAEGRVRKAISVLKNRGGVHEDAIREFRIDKDGVRVGEPLRAFRGVLTGTP
EYLGATKPLMEDRTSDA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcaagatcatttcgaccggcaatgtgggcctggacaagatattgggcggcggc
atccccgccagtcgtctctatctgctggaaggcgcgccgggatcgggcaagactacgctc
gcgctgcaatttctgcgcgagggcatccgtaagggcgagcgggttctgtacatcaccctg
tccgaaacccgcgaggaactgggcgccgtcgccgcgtcccatgactggacgctcgatggc
ttcgacgtgttcgaactggaatccgccgatgacgtattcggcaatggtcgcgaacaatcc
atcatccacccgtgggaaatggagctgggcgaaaccatccgcctgatccaggacgaagtg
gagcgggtccgccccactcgcgtcgtgttcgacagcctgtccgaaatgcgcctgctggcg
caggatccgctgcgctatcgtcgtcaggttttggccctgaagcaattcttctccggccgc
gacagcaccgtcatcctggtcgacgacatgaccggatcggccgacgcccgcgacgcccat
ctgcacagcctgtgccatggcgtcgtcacgctggaacggctgacgctggactttggcgcg
gcgcgccggcgcatgcaggtgcagaaactgcgcggcatagacttcaccgccggctatcat
gacatgatgatccgcaagggcggcgtggatatcttcccccgcctgatcgccgccgatcat
catagcgatttcaccggcgacatggtgcagagcgaagttgtggaactcgacgccttgctg
ggcggtggcccgatgcgcggcaccagcacgctgatcaccggaccggccgggtcgggcaag
accaccatcgccctgcaatatctttatgccgcctgcgaacggggcgagccatgcaccctg
ttcgaatttgacgagcgtgtcggcacattgctaacccggtccaacgccttcggcctggat
atcacccgccatgtcgatcagggctgcctgacgatccagcagatcgacccggccgaaatc
tcgccgggcgaatttgccgcgcgcgtccggcacgaggtggaggaacgcggcgtccgcatg
atcgtgatcgacagcctgaacggctatatggccgccatgccccaggaacagcaattgctg
ctccagatgcacgaactcctctcctatctcagccagcggggcgtggtgaccttcctcatc
aatccgcagcatgggctggtgggcacgatgtcgaccaacctcaatatctcctacgtcgcc
gacaccgtcgtgctgctgcgctttttcgaagcggaagggcgcgtgcgcaaggccatttcc
gtgctcaagaatcgcggcggcgtgcatgaagacgccatccgggaatttcgcatagacaag
gatggcgtgcgggtgggcgagccgttgcgcgcattccgtggggtgttgaccggcacgccc
gaatatttgggcgccaccaaacccctgatggaagatcgcaccagtgatgcctga
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