Sphingobium sp. YG1: YGS_C1P0587
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Entry
YGS_C1P0587 CDS
T05858
Name
(GenBank) pyruvate dehydrogenase E1 component beta subunit
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00010
Glycolysis / Gluconeogenesis
spyg00020
Citrate cycle (TCA cycle)
spyg00620
Pyruvate metabolism
spyg00785
Lipoic acid metabolism
spyg01100
Metabolic pathways
spyg01110
Biosynthesis of secondary metabolites
spyg01120
Microbial metabolism in diverse environments
spyg01200
Carbon metabolism
spyg01210
2-Oxocarboxylic acid metabolism
Module
spyg_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
YGS_C1P0587
00020 Citrate cycle (TCA cycle)
YGS_C1P0587
00620 Pyruvate metabolism
YGS_C1P0587
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
YGS_C1P0587
Enzymes [BR:
spyg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
YGS_C1P0587
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GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
PFOR_II
QRPTase_N
Peptidase_M23
Ribosomal_60s
Transketolase_C_1
RnfC_N
ATP-synt_ab_Xtn
Motif
Other DBs
NCBI-ProteinID:
BBC99331
UniProt:
A0A2Z6ABH6
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All DBs
Position
1:597904..599277
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AA seq
457 aa
AA seq
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MGIEIKMPALSPTMEEGTLAKWLVKEGDEVKSGDILAEIETDKATMEFEAVDEGQIGKIL
IAEGSEGVKVGTVIATMAGEGGEEAPAPAPKAAEAPKADAEAPKKAESGTSKLASEARAT
VQDPDLPEGTEFVKTTVREALRDAMAEEMRKDERVFVMGEEVAEYQGAYKVTQGLLDEFG
DKRVIDTPITEYGFAGIGAGAAMGGLRPVIEFMTFNFAMQAIDHIINSAAKTNYMSGGQM
RCPIVFRGPNGAASRVGAQHSQNYGPWYAAVPGLIVIAPYDAADAKGLLKAAIRSTDPVV
FLENELLYGRSFDVPKVDDYVLPIGKARIMRPGKDVTLVSYSIGVGLALDAAATLAEEGI
DAEVIDLRTLRPLDTATVLESLKKTNRLVVVEEGWPTCSIASEIAAVVMEQGFDDLDAPV
LRVTNEDVPLPYAANLEKLALIDAARVVAAAKKVCYK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgaaatcaagatgccggcgctctcgccgacgatggaagagggcacgctggcc
aaatggctggtgaaggaaggcgacgaagtgaagtcgggcgatatcctggcggaaatcgaa
accgacaaggcgacgatggaattcgaagccgtcgatgaaggccagatcggcaagatcctg
atcgccgaaggcagcgaaggcgtgaaggtcggcaccgtgatcgccacgatggcgggcgaa
ggcggcgaagaagcgcctgcaccagcgcccaaggctgccgaagcccccaaggccgacgcc
gaagcccccaagaaggccgaaagcggcacgtccaagctggcgtccgaagcccgcgcgacc
gtgcaggatccggaccttcccgaaggcaccgagttcgtcaagacgacggtccgcgaagcg
ctgcgcgacgcgatggccgaagaaatgcgcaaggacgagcgcgttttcgtgatgggcgag
gaagtcgccgaatatcagggcgcgtacaaggtgacgcagggcctgctcgacgaatttggc
gacaagcgcgtcatcgacacgccgatcaccgaatatggctttgccggcatcggtgcgggc
gcggccatgggcggcttgcgcccggtcatcgagttcatgacgttcaatttcgccatgcag
gcgatcgaccacatcatcaactcggcggccaagaccaactacatgtccggcggccagatg
cgttgcccgatcgtgttccgtggtcccaacggcgcggccagccgcgtcggcgcgcagcac
agccagaattacggtccctggtatgccgccgttcccggcctgatcgtcatcgcgccttat
gacgcggctgatgcgaaaggcctgctgaaggccgcgatccgctcgaccgatccggtcgtg
ttcctggagaatgaacttctctacggtcgcagcttcgacgtgcccaaggtggacgattat
gtcctgccgatcggcaaggcccgcatcatgcgtccgggcaaggacgtcacgctggtcagc
tactcgatcggcgtgggccttgcgctcgacgcggcggcgacactggccgaggaaggtatc
gacgccgaagtgatcgatctgcgcacgctgcgcccgctcgacaccgcgacggtgctggaa
agcctgaagaagaccaaccgcctggttgtggtggaagaaggctggccgacctgctcgatc
gcgtcggaaatcgccgctgtcgtcatggagcagggcttcgacgatctcgacgcgccggtt
ctgcgcgtcaccaacgaagacgtgccgctgccctatgccgcgaaccttgaaaagctggcg
ctgatcgacgcggcccgcgtggtcgcggcggccaagaaggtctgttacaagtaa
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