Sphingobium sp. YG1: YGS_C1P0694
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Entry
YGS_C1P0694 CDS
T05858
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spyg03032
]
YGS_C1P0694
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C1P0694
Enzymes [BR:
spyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YGS_C1P0694
DNA replication proteins [BR:
spyg03032
]
Prokaryotic type
DNA Topoisomerases
YGS_C1P0694
DNA repair and recombination proteins [BR:
spyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YGS_C1P0694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBC99438
LinkDB
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Position
1:complement(715210..717909)
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AA seq
899 aa
AA seq
DB search
MTDETVLADPSDISPISIVDEMKASYLDYAMSVIVARALPDVRDGLKPVHRRILFSAQES
GFVYNRPYRKSARLVGEVMGKYHPHGDSSIYDALARMTQDWSMRVPLIDGQGNFGSMDPD
PPAAMRYTEARLAKVATALLDDLDKDTVDFTPNYDASESEPQVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVLRACLAYIDNPDITTDELIQIVPGPDFPTAPLILGQSGARSAYHT
GRGSIMMRSRHVVEEGRGDRQSIVLTAIPYQVGKNGLVEKIAEAAKDKRIEGISDIRDES
SREGVRIVMDLKRDATPDVVLNQLWRNTPAQSSFPANMLAIRGGRPELLGLREIIEAFVK
FREEVITRRTKFELNKARDRAHILLGLVVAVSNLDEMVKIIRGSTSPAEAREKLLAREWP
IGEIAPYLRLVEAIETDVHGDVYKLSDIQVRAILDLRLHRLTALGRDEIGKELAELAEAI
AEYLAILGDRVKLYAVMREELEAVEREFATPRLSEITAAADGIEDEDLIEREEMVVTVTV
QGYIKRTPLESFRAQARGGKGRSGMATKDEDAVTEMFVTSTHTPVLFFSTAGKVYRMKVW
RLPEGGPATRGRPMVNLLPLGPGETIRTVLPLPEDEDSWKELHVMFATANGTVRRNSMDA
FANIPSNGKLAMRFDEGSDDRLIGVALLTEEDDVLLATRQGKAIRFAATDVREFQSRTST
GVRGMTLKADDEVISLSILKGFDATPDERDAYLRAAPWKDNDAESTLPAERAAQFAAAEQ
FILTVCTNGYGKLSSAYDYRRTGRGGQGITNIDNIARNGRVVASFSATQANQLMLVTDQA
KLIRMGLDSLRVISRNSAGVRLFNVADNEHVVSAAKIEEAEEVEAPEAGSEAGSGMGEA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgagactgtcctcgccgacccttcggacatcagccccatctccatcgtcgac
gagatgaaggccagctatctcgattacgccatgtccgtcatcgtcgcccgcgccctgccg
gacgtgcgcgacgggttgaagccggtccatcgccgcattctcttctccgcccaggaatcg
ggcttcgtctacaaccgcccctatcgcaagtccgcccgtctggtcggtgaagtcatgggt
aaatatcacccccatggcgacagctcgatctacgatgcgttggcccgcatgacccaggat
tggtcgatgcgcgtgccgctgatcgacggtcagggcaatttcggatcgatggaccccgat
ccgccagccgccatgcgctataccgaagcgcgcctggcgaaggtcgcgaccgcactgctg
gacgatctcgacaaggacaccgtcgatttcacgcccaactatgatgcctccgaaagcgag
ccgcaggttttgcccgcgcgcttccccaacctgctggtcaatggcgcgggcggcatcgcg
gtcggcatggcgaccaatatcccgccgcataacctcggcgaagtgctgcgcgcctgcctg
gcctatatcgacaatcccgacatcacgaccgacgaactgatccagatcgtccccggcccc
gatttcccgactgccccgctgatcctgggccagtcgggcgcgcgcagcgcctatcacacc
ggccgcggttccatcatgatgcgctcacgccatgtggtggaggaaggacgcggcgatcgc
cagtcgatcgtcctgaccgcgatcccctatcaggtcggcaagaacggcctcgtcgaaaag
atcgccgaagccgccaaggacaagcggatcgagggcatcagcgacattcgcgacgaatcg
agccgcgaaggcgtgcgcatcgtcatggacctgaagcgcgacgccacgccggacgtcgtg
ctgaaccagctgtggcgcaacaccccggcgcagtcgagcttcccggccaacatgctcgcg
atccgcggcggccgcccggaattgctgggcctgcgcgagattatcgaggccttcgtcaag
ttccgcgaagaggtcatcacccgccgcaccaagttcgaactgaacaaggcgcgcgaccgg
gcgcatatcttgctcggccttgtcgtcgcggtcagcaacctcgacgaaatggtcaagatc
atccgtggctcgaccagcccggccgaagcccgcgaaaagctgctggcgcgcgaatggccg
atcggtgagatcgcgccctatctgcgcctggtcgaagcgatcgagacggacgtccatggc
gacgtctacaagctgtcggacattcaggtccgcgccatcctcgacctgcgcctgcatcgc
ctgacggcgctgggccgcgatgaaatcggcaaggaactggccgaactggccgaagccatc
gccgaatatctcgctatcctgggcgaccgggtgaagctctacgcggtgatgcgcgaggaa
ctggaagcggtcgaacgcgaatttgcgaccccgcgcctgtcggaaatcaccgctgccgcc
gacggcatcgaggacgaagacctgatcgagcgcgaggagatggtcgtcaccgtcaccgtg
cagggctatatcaagcgcaccccgctcgaaagctttcgcgcccaggcgcgcggcggcaag
ggtcgttcgggcatggcgaccaaggatgaagacgccgtcaccgaaatgttcgtgacgtcg
acccatacaccggtgctgttcttctcgaccgccggcaaggtctaccgcatgaaggtgtgg
cgcctgcccgaaggtggcccggccacccgtggccgtcccatggtcaacctgctgccacta
ggtccgggcgaaaccatccgcaccgtcctgccgctgcccgaagatgaggacagctggaag
gaattgcacgtcatgttcgcgaccgcgaacggcaccgtgcgccgcaacagcatggacgcc
ttcgccaatattcccagcaacgggaaactggcgatgcgcttcgacgaaggtagcgacgat
cgcctgatcggcgtcgccctgctgaccgaagaggacgacgtcctgctcgccacccgtcag
ggcaaggcaatccgctttgccgccaccgacgtgcgtgaattccagagccgcacctcgacc
ggcgtgcgcggcatgacgctcaaggccgatgacgaggtgatctcgctgtcgatcctcaag
ggcttcgacgcgacaccggacgaacgcgacgcctatctgcgcgccgcgccgtggaaggat
aatgacgccgaatcgaccctgccagccgagcgcgccgcacaatttgcggcggcggaacag
ttcatcctgaccgtctgcaccaatggctatggcaaattgtcgtcggcctatgactatcgc
cgcaccggccgtggtggtcagggcatcaccaatatcgacaatatcgcccgcaacggccgt
gtcgtcgccagcttctccgccacgcaggcgaaccagctgatgctcgtcaccgatcaggcg
aaactgatccgcatgggcctcgacagcctgcgcgtcatcagccgcaattcggccggcgtc
cgcctgttcaacgtcgccgacaatgagcatgtcgtcagcgccgcgaagatcgaggaagca
gaagaagtcgaagcccctgaagcaggttcggaagcaggttcgggcatgggggaagcgtga
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