Sphingobium sp. YG1: YGS_C1P0997
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Entry
YGS_C1P0997 CDS
T05858
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00550
Peptidoglycan biosynthesis
spyg01100
Metabolic pathways
spyg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YGS_C1P0997
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YGS_C1P0997
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spyg01011
]
YGS_C1P0997
Enzymes [BR:
spyg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YGS_C1P0997
Peptidoglycan biosynthesis and degradation proteins [BR:
spyg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
YGS_C1P0997
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bMG1
EABR
Motif
Other DBs
NCBI-ProteinID:
BBC99741
UniProt:
A0A2Z6ACQ1
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All DBs
Position
1:complement(1070850..1072925)
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AA seq
691 aa
AA seq
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MKFPFPKRKIVTEATQSFTFSRRAMVVGGLQGAIGAVLVGRMAWISVVQNEKYSLLSESN
RVNLTLIPPRRGWIIDRNGRPLANNRTDFRVDLIPQRIVDAEATITHLAQLLKLEPDDVD
RIREDLEKSAGFRPVQVADKLTYDQYAAISVRLPDLPGVAPSQGFSRHYPAGATVGHLLG
YVGPATAEDYKARRDPLLITPGFKVGKDGLEKAFDRHLTGKPGAKRVEVTARGKIVQELT
TRTDTPGRTIKLTIDAGLQEFAGRRLATQSGSVVVIDCHNGDVLALASMPSFDPNSFSDG
ISHLEYEMLSKDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGIGPQETINCPGAIRVG
NTLFHCHKRRGHGPLNMRGAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQKFDLPFPS
QSYGTVPDPAWKERKYNQKWQVYDTVNATIGQGYMLINPLQMAVMAARLATGRQLMPNFI
FGAPRPDPASVGASEEHLVVIRDAMNAVVNGGGTGGAARSSIPGVMIAGKTGTAQVRRIT
MAERAGGVRGNSSLAFKLRDHALFQGFAPFDNPRYAIACIIEHGGHMIRNEDAPMIASDT
LSYLFDPAKAMEKLETLEKGWGGTPTERQARQMASFRIAKAIEKGEVPPPADNGMNAASG
NASAPAAPSSAPPSPAEEDDVPPAANSPVAP
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcccgttccccaagcgcaagatcgtcaccgaagccacccaatccttcaccttc
tcgcgccgcgcgatggtggtggggggattgcagggggcgatcggcgccgtgctggtcggg
cgcatggcctggatcagcgtcgtccagaatgagaaatacagcctgctgtcggagagcaat
cgcgtcaacctgacgctgataccgccgcgccggggttggatcatcgaccgtaacgggcga
ccgctggcgaataatcgcacagatttccgagtcgacctgatcccgcagcgcatcgtggat
gcggaggcgacgattacccatctggcccagttgctcaagctggagccggacgatgtcgat
cgcattcgcgaggatctggaaaaatccgccggtttccgcccggtgcaggtcgccgacaag
ctgacctacgatcaatatgccgcgatcagcgtgcgcctgcccgacttgccgggcgtcgca
ccgagccagggcttctcgcgtcattatccggccggtgcgacggtcggccatttgctgggc
tatgtcggcccggcgacggcggaagattataaagcgcggcgcgatccgctgctgatcacg
ccgggcttcaaggtcggcaaggacgggctggaaaaggcgttcgatcgccatctgaccggc
aagcccggcgccaagcgggtcgaggtgacggcgcgcggcaagatcgtccaggaattgacg
acccgcaccgacacgccggggcgcacgatcaaattgacgatcgatgcgggcctgcaggaa
tttgccggacggcgtctggccacccagagcgggtcggtggtggtgatcgactgccacaat
ggcgacgtactggcgctggcgtccatgcccagcttcgatccgaacagcttctccgatggt
atcagccatctggaatatgagatgctgtcgaaggacgatcatgtccccctgcgcaacaag
acgttgcaagggctgtatccgcccggttcgacggtgaagcccatggtggcgctggcgctg
ctggaggcggggatcggcccgcaggaaacgatcaattgccccggcgccattcgcgtcggc
aacacgctgttccattgccacaaacggcgtggccatggaccgctcaacatgcgcggtgcg
atcgcccaaagctgcgacatctatttctatcagatggcccagcgtatcggcatggaccgg
atcgccagcatggcgcgacgcgtcggcatgggccagaaattcgacctgcccttccccagc
caaagttatggcaccgtgccagatccggcatggaaggaacggaaatataaccagaaatgg
caagtctacgacacggtgaatgccaccatcggtcagggctatatgctcatcaacccgcta
cagatggccgtgatggcggcgcggctggcgaccggcaggcagctgatgccgaatttcatc
ttcggtgccccccggcccgatccggcgtcggtcggggcgagcgaggagcatctggtcgtc
atccgcgatgccatgaatgcggtggtcaatggcggcggcaccggcggcgcggcgcgcagt
tccattccaggcgtgatgatcgccggcaagaccggcaccgcacaggtccgccgcatcacc
atggcggagcgcgccggcggcgtgcgtggcaacagctcgttggcgttcaagctgcgcgat
catgccctgtttcagggtttcgcgccgttcgacaatccgcgctatgccatcgcctgcatc
atcgagcatggcggccatatgatccgcaatgaggacgcgccgatgatcgccagcgatacg
ctgtcctatctgttcgatccggccaaggcgatggagaagctggaaacgctggagaaaggc
tggggcggcacgccgaccgagcggcaggcgcgacagatggcgtctttccgcatagccaag
gcgatcgagaagggcgaagtaccgccgcccgcggacaatgggatgaatgccgccagcggc
aacgcatctgcgccagcagcgccatcctcggctcccccctccccggcggaggaggatgat
gttccaccggccgccaacagcccggtcgcgccatga
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