Sphingobium sp. YG1: YGS_C1P1001
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Entry
YGS_C1P1001 CDS
T05858
Name
(GenBank) DNA mismatch repair protein MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YGS_C1P1001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C1P1001
DNA repair and recombination proteins [BR:
spyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
YGS_C1P1001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BBC99745
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Position
1:1075587..1077383
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AA seq
598 aa
AA seq
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MSIRRLPEHLVNRIAAGEVVERPASALKEIVENALDAGATRIAIRLSHGGLDRIEVSDDG
CGMDSADMALALERHATSKLPDDAIENVATLGFRGEALPSIASVARLSIDSRPRGADGWN
RTVDNGQLVSEGPAALPPGTRVTVEQLFGKVPARRKFLRTTKAEYAACIDIVRRLAMAHP
SVAFSVEHDGRRVLGVQGGEAREERVAALTDRALADNHVIVSLEREGVQLSGVASLPTYN
RGVGDHQYLFVNGRPVRDRLLIGALRGAYADMLARDRHPVVALFLDVPPLEVDVNVHPAK
TEVRFRDPALIRGMIVSGLRRALDAEGFRAVQNADPAALSAWKPEPISPTPIGSMPIFEA
AGAVPPPSYNQFTPSAAFADRRSSFITPPPQARAEPAAAPAPEGRSFPLGVARGQVARTY
IVAEAEDGLVIVDQHAAHERLTLERMRRAMEGQGVASQALLLPEVVELEETACDRLEARI
AELKEFGLDLERFGPSAMLVRSVPAMLGQADVQGMVTDLADDLAAYDSALSLKERLDLVA
ATMACHGSVRAGRVLSVAEMNALLREMEVTPRSGQCNHGRPTWVKLGHGDIEKLFGRK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatacgccgtctacccgaacatctggtcaatcgtatcgctgccggtgaagtggtc
gaaagacccgccagcgcgctgaaagagatcgtcgaaaacgctttggacgctggcgcgact
cgcatcgcgatccgcctgtcccatggcgggctggaccggatcgaggtcagcgatgacggc
tgcggcatggattcggccgacatggcgctggcgttggagcgtcatgccacgtcgaaactg
cccgacgatgccattgaaaatgtggcgactttgggtttccggggggaggcgctcccctcc
atcgccagcgttgcgcgcctgtcgatcgacagccggccgcgtggcgccgatggctggaac
cgcaccgtggacaatgggcaactggtatccgagggaccggcggcacttccgcccggcacc
cgcgtcacggtcgagcaactgttcggcaaggtgccggcgcggcgcaaattcctgcgcacg
accaaggccgaatatgccgcctgcatcgacatcgtccgccgtctcgcaatggcacatccc
tcggtcgctttttcggtcgagcatgatggccgccgcgtgctgggcgtgcaggggggcgaa
gcgcgggaggagcgggtggccgcgctgaccgaccgggcgctggccgacaatcatgtcatc
gtcagcctagagcgggaaggggtgcaactgtccggcgtcgcctcgctgcccacatacaat
cggggcgtgggcgatcatcaatatctgttcgtcaatggccgcccggtgcgcgaccggttg
ctgatcggcgcgttgcgaggcgcctatgccgatatgctggcgcgcgatcgccatccggta
gtcgccctgttcctggatgtcccgccgctggaagtggacgtcaacgtccatcccgccaag
accgaagtgcgctttcgcgacccggcgctgatccgtggcatgatcgtgtccggcctgcgc
cgtgcgctggatgccgaaggcttccgggctgtccagaatgccgaccccgcagccttgtcc
gcctggaagccggagccgatttcgccgacgccgatcgggtcgatgccgatcttcgaggcg
gcgggcgctgtgccgcctcccagctataatcagttcaccccatccgccgccttcgccgat
cgccgaagctcgttcatcacgcctccgccgcaggcccgcgccgaacccgccgctgcgcct
gccccggaaggtcgcagtttcccgctcggcgtcgcgcgcggacaggtggcgcgcacctat
atcgtcgcggaagccgaggatggcctcgtcatcgtcgaccagcatgccgcgcatgaaagg
ctgacgctggagcggatgcgccgcgcgatggaggggcagggtgtagcgtcccaggctttg
ctgctgcccgaagtggtcgaactggaggaaaccgcctgcgaccggctggaggcgcggatc
gccgaactcaaggaattcggcctcgacctcgaacggttcggtccttcggccatgctggtt
cggtccgtcccagcgatgttgggccaggctgatgtgcaaggcatggtcacggatctggcc
gacgatctggcggcctatgacagcgccttgtcattgaaggaacggctggatctggtcgcc
gcgaccatggcctgccacggctcggtccgcgctggccgggtgctgagcgtcgcggaaatg
aacgcgctgctgcgggagatggaagtcacaccccggtccggccagtgcaatcatggccgc
ccgacctgggtgaagctgggccatggcgatatcgagaagctgttcgggcgaaaatag
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