Sphingobium sp. YG1: YGS_C1P1036
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Entry
YGS_C1P1036 CDS
T05858
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C1P1036
Enzymes [BR:
spyg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
YGS_C1P1036
DNA repair and recombination proteins [BR:
spyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
YGS_C1P1036
Prokaryotic type
YGS_C1P1036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBC99780
LinkDB
All DBs
Position
1:1112863..1114260
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AA seq
465 aa
AA seq
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MARIGLGMSKPVLLWLRQDLRLSDQAALAAAAAEGPVIPVYILDDESPRQWAMGGAARWW
LHHSLSRLDESLRDKGSRLILRRGKSVDVLAALAKEVGASRIHALHHYEPWWRNAEKAVA
KLLDLCLHDGGLLLPPGAVRTGAGGMYRIYTPFARAVMEHMPPPPPHPAPAHIEAPTQWP
KSESLESWALLPTKPDWATGFAKDWTPGETGARANVANFLDEAGDYPTARNLPSVEGTSR
LSAHLHFGEVSPAYVWHRVESSGHDAAIFLKELIWRDYAHLQICELPTYGSANARTDFDR
LNWRDLREAGADFTAWKTGRTGYPIVDAGMRQLWTTGWMHNRVRMIAASFLIKHLLIDWR
HGARWFWDTLVDADYANNSVNWQWVAGSGVDANLFTRIMAPLTQSDKFDAADYIREWVPE
LSDLSDAVIHDPDAHGARPPSYPAKIIGHREGRERALEAYRRSKG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcattggcttgggcatgtccaaacccgtcctgctctggctccgccaggatctt
cgcctgtccgatcaggctgcactggcagccgccgccgctgaagggccggtcatacccgtc
tatatattggacgatgaaagcccacgccaatgggcgatgggcggcgcggcgcgatggtgg
ctgcaccatagtctgagccggctggacgaaagcctgcgggacaaggggtcgcgcctgatc
ctgcggcgcggcaagagcgtggatgtgctagcggcgctggcgaaggaagtgggcgcatcg
cggatccatgcgctgcatcattatgagccatggtggcgcaatgccgaaaaggcggtcgcc
aagctgctggacctgtgcctgcatgacggcggcctgttgcttccgcccggcgcagtgcgg
acgggggcggggggcatgtatcgcatctacacgccctttgcccgcgcggtgatggagcat
atgccgccaccgccgccccatcccgcgccggcccatatagaagcgccgacgcaatggccc
aagagcgagtcgctggagagttgggcgttgctgccgaccaagccggattgggcgaccggt
tttgcgaaggactggacgccgggggaaacgggcgcgcgcgccaatgtcgcgaattttctc
gatgaagcgggcgactatccgaccgccagaaacctgccttcggttgagggcacgtcgcgt
ctgtccgcgcatcttcacttcggcgaagtgtcgcctgcctatgtctggcaccgtgtcgaa
agttcagggcatgatgcagcaatctttcttaaagagctgatctggcgggattatgcccat
ctccagatttgtgaattgcccacctatggatcggccaatgcccggaccgatttcgatcgg
ctgaactggcgcgacctgcgggaagcgggggcggacttcacggcctggaagacgggacgg
acgggctatccgatcgtagatgcgggtatgcggcagctttggacgacgggatggatgcat
aaccgtgtgcgcatgattgccgccagcttcctgatcaagcatctgctgatcgactggcgc
catggcgcgcgctggttctgggatacgctggtcgatgccgattatgccaataacagcgtc
aattggcagtgggtggcgggcagcggcgtggacgccaatctcttcacccgcatcatggcg
ccgctgacccagtcggacaagtttgacgcagccgactatattcgcgaatgggtgcccgaa
ttgagcgacctgtccgatgcggtgatccatgatcccgacgcccatggcgcgcgcccgccc
agctatcccgccaagatcatcggccatcgcgaagggcgtgagcgtgcgctggaggcctat
cgccgtagcaaggggtga
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