Sphingobium sp. YG1: YGS_C1P1124
Help
Entry
YGS_C1P1124 CDS
T05858
Name
(GenBank) ATP-dependent helicase/nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C1P1124
Enzymes [BR:
spyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YGS_C1P1124
DNA repair and recombination proteins [BR:
spyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
YGS_C1P1124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BBC99868
UniProt:
A0A2Z6AD04
LinkDB
All DBs
Position
1:1212774..1215743
Genome browser
AA seq
989 aa
AA seq
DB search
MGERSQPALFTIPAHRAFADALVAGLLAQHRGDPMALAQGMVLLPNNRAIRAVSDAFVRQ
SNGGLLLPRLVAIGDPELGEQVGGALDPLGEEDAVPPAIAPMRRQMILARMVQAAKPDID
AGQALLLGQALGAVLDQMQVERVPLSALHKLQLSDELSKHWQTSLTMFEILIAQWPMELA
RTGCIDLADRRNRLFDRLTVRWGAHPPAGFVAAAGIASTAPAVAALLRRIGMMANGMVVF
AGLDQHMDEEAWQAIGPFDADPVTGRAPSGHESHPQYALKRLLDAMSATREDVANWRWGS
EHDARAVRSRNISNAMLPPRLTSRWRDLKTADRSLSGVEALEVATPGEEAQAIAIALREA
LETPERTAALVTPDRQLATRVSAHLRRWGIAADDSAGQPLSRLLPGTLLITMAEAVAERF
APVPLLTLLKHPLVMRGEGRLGWLEGVRALDLLLRGPRPQAGLHGIDLLLLPRPDDRQRV
LREAVREWWPQARALLEPLESGFDRAIDLGEQLAALREQAGALSGDAVWSGHQGHAAADL
FAEMEAAAPEGPRQADPRALPVLLDHMLGGVSVRPPQGGHPRISILGLIEAQLMQADLMI
LGGLNEGTWPGLPSPDPWLAPRIRRELGLPGLEMRIGLAAHDFASALGAPHVLITRARRG
SGGPAVASRFWLRLKAMAGPQWKSAQRYAMLAQAMDAPGAHRPAERPAPAPPSSVRPNLI
PVTDVDRLKADPFAFYAKRVLRLARLDPVDADAGPAWRGTAVHDILQRWAEAGTLDPADL
EERARAMFDQPDVHPLLKALWQPRLIEAIRWIAAEVVKDKAEGRTILAVEREGRADIAGV
TLMGKADRIDRLADGRIGIIDYKTGKPPSARQVKAGFSLQLGLLGIIAEMGGFDGLGSQP
KAGDFEYWSLAKKGDQFGYRERPVDPLGKRDKIVTDQFTAHAHEHFEELANAFLLGTAPF
RAEINPEVANYGDYDQLMRLEEWYGRDDG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagcgcagccaacccgctttgttcaccatccccgcgcatcgcgcctttgccgat
gcgctggtagcgggcctgctggcgcagcatcgcggcgatccgatggcgctggcgcagggc
atggtgctgctgcccaacaaccgggcgatccgtgccgtcagcgacgccttcgtgcgccag
tcaaacggcggtctgctgttgccgcgcctagtcgcgatcggcgatccggagcttggggaa
caggtcggcggcgcgctcgatccactgggtgaggaagacgcggtgccgcccgcgatcgca
ccgatgcgccggcagatgatcctggcgcggatggtacaggcggccaagccagacatcgat
gcgggccaggcattgctgctggggcaggcgttgggcgccgtgctggatcagatgcaggtg
gagcgagtgccgctgagcgcgctgcacaagctgcaactgtccgacgaactgtcgaaacat
tggcagacgtcgttgaccatgttcgaaattttgatcgcgcagtggccgatggaactggcc
cggaccggttgcatcgacttggccgatcgccggaaccggctgttcgatcggctgacggtg
cgctggggtgcgcatccgcctgccggcttcgtggcggcggcgggcatcgcctccaccgcg
cccgctgtcgctgcattgctccgccggatcggcatgatggcgaacggcatggtcgtgttc
gccggcctcgaccagcatatggatgaggaagcatggcaggctatcggtccgttcgacgcc
gatcccgtcaccggtcgcgcgccgtccggccatgaaagccatccccaatatgcgctgaag
cgcctgctcgacgccatgagcgcaacgcgcgaggatgtcgccaactggcgctggggcagc
gagcatgatgcccgtgcggtgcgcagccgcaatatctccaacgcgatgctcccaccccgg
ctgaccagtcggtggcgcgacctgaagaccgccgaccgatctctgagcggcgtggaagca
ctggaagtcgcgacaccgggcgaggaggcgcaggcgatcgccatcgccctgcgcgaggct
ctggaaacgcccgaacgcactgctgcgctggtgacgcccgaccggcaactggcgacgcgc
gtgtccgctcatctgcgccgctggggcatagcggccgacgattccgccggtcagcctctc
tcgcgcctgctccccggtacactgctgatcaccatggcggaggcggtcgcggaacgcttc
gcgccggtgccgctgctgacgctactgaaacatccgctggtcatgcgtggcgaaggacgg
cttggctggctggaaggcgtacgcgcgctcgacctgctgctgcgcggaccgcggccgcag
gcagggctgcacggcatcgacctgctgctgctcccacgcccggacgaccgccagcgggtg
ctgcgcgaggcggtacgggagtggtggccgcaggcccgcgccctgctggagccgttggaa
agcggctttgaccgggccatcgaccttggcgagcaactggcggccttgcgcgagcaggcc
ggggcattgtcaggcgatgccgtctggtccggccatcagggtcacgccgccgccgacctg
ttcgccgaaatggaggctgccgcgcccgaaggcccgcgccaggccgatccgcgcgccttg
ccagtgctgctggaccatatgctgggcggcgtatcggtgcgcccgccacagggcggccat
ccgcgcatcagcatattgggcctgatcgaagcgcagttgatgcaggccgacctcatgatc
ctgggcggcctgaacgaaggcacatggccgggcctgccgtcgcccgacccatggctggcg
ccgcgcattcggcgcgaactggggttgccggggctggaaatgcggatcggccttgccgcg
catgatttcgccagcgcactcggcgcgccgcatgtccttatcacccgcgcgcggcggggg
agcggcgggccggcggttgcttcacgcttctggttgcgcctgaaggccatggccggaccg
caatggaaatcggcgcagcgctacgcgatgctggcgcaggcgatggatgcgcccggcgcg
catcgccctgccgaacgcccagcgcctgcaccgccctcttccgtgcgaccgaacctcatt
ccggtcaccgatgtcgatcggctgaaggctgacccgttcgccttctacgccaagcgggtg
ttgcgcctggcccggcttgatccggtcgatgccgatgccggtccggcctggcgtggcacg
gcggtccacgacattctccagcgctgggcggaagccggaacgctggaccccgccgatctg
gaagagcgcgcacgcgccatgttcgaccagccggacgtccacccgctgctcaaggccctg
tggcagccccggttgatcgaagcgatccgctggatcgcggccgaagtggtgaaggacaag
gcggaaggccgcaccatcctggcggtcgagcgggaagggcgagccgacattgccggcgtg
acgctgatgggcaaggccgaccggatcgatcgcctcgccgatgggcgcatcggcatcatc
gattacaagaccggcaagccgcccagcgcgcggcaggtgaaggccggcttttccctgcaa
ttggggttgctgggcatcatcgccgagatgggcggattcgatgggttgggatcgcaaccc
aaggccggcgatttcgaatattggtcgctggccaagaagggcgaccagttcggctatcgc
gaacgtccggtcgatccgctgggcaagcgtgacaagatcgtcaccgaccagttcaccgcc
cacgcccatgagcatttcgaggaactggccaacgccttcctgctgggcaccgcgcctttc
cgggcggagatcaaccccgaagtcgccaattatggcgattatgaccagctgatgcggctg
gaggaatggtatggccgcgacgatggctaa
DBGET
integrated database retrieval system
