Sphingobium sp. YG1: YGS_C1P1486
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Entry
YGS_C1P1486 CDS
T05858
Name
(GenBank) aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00020
Citrate cycle (TCA cycle)
spyg00630
Glyoxylate and dicarboxylate metabolism
spyg00640
Propanoate metabolism
spyg00720
Other carbon fixation pathways
spyg01100
Metabolic pathways
spyg01120
Microbial metabolism in diverse environments
spyg01200
Carbon metabolism
spyg01210
2-Oxocarboxylic acid metabolism
spyg01230
Biosynthesis of amino acids
Module
spyg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spyg_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
spyg_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YGS_C1P1486
00630 Glyoxylate and dicarboxylate metabolism
YGS_C1P1486
00640 Propanoate metabolism
YGS_C1P1486
09102 Energy metabolism
00720 Other carbon fixation pathways
YGS_C1P1486
Enzymes [BR:
spyg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
YGS_C1P1486
4.2.1.99 2-methylisocitrate dehydratase
YGS_C1P1486
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
BBD00231
UniProt:
A0A2Z6AE31
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Position
1:complement(1603070..1605739)
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AA seq
889 aa
AA seq
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MTVIGQDTLGTRDTLNVGGKDIAYYSLKKAAQKLGDVSRLPFSMKVLLENLLRFEDGVTV
TAEDIQAIVDWQNDRGKAEREIQYRPARVLLQDFTGVPCVVDLAAMRDAMNALGADASKI
NPQVPVHLVIDHSVMVDEFGTPKAFEQNMEIEYQRNMERYDFLKWGSKSLANFYAVPPGT
GICHQVNLENIAQGVWSSVDESGATVAYPDTCVGTDSHTTMVNGLGVLGWGVGGIEAEAA
MLGQPVSMLIPEVVGFKFTGTLKEGVTATDLVLTCTQMLRARGVVGRFVEYFGPGLATLS
LADRATLANMAPEYGATCGFFGIDDKTLDYMRLTGRPDETIALVEAYAKEQGFWIDPSIE
PVFTDTLELDLSTVVPSLAGPKRPQDRVALPDVDDVFNADMVNTYKKAQTRVPVEGKDFD
IGDGDVTIAAITSCTNTSNPSVLIAAGLVAKKANELGLKPKPWVKTSLAPGSQVVTDYLE
KAGLQSHLDAIGFNLVGYGCTTCIGNSGPLAPAISAAINENGLVAAAVISGNRNFEGRVS
PDVRANFLASPPLVVAYALKGTVIEDFLTTPIGVSTAGNDVYLKDIWPTNDEIATTIAGA
VDRPMFQARYANVYKGDAHWQAIDVTGSDTYQWRAGSTYVANPPYFEGLSMTPAPVTDIV
EAKPLAIFGDSITTDHISPAGSIKASSPAGKWLSEHQVSQADFNSYGSRRGHHEVMMRGT
FANIRIKNLMLDGVEGGMTSYDGEVMPIYDAAMKHKADGTPLVVIGGKEYGTGSSRDWAA
KGTNLLGVRSVIVESFERIHRSNLVGMGVLPLQFKDGDTRDTLGLTGDETFTIQGVADLK
PRQDVDVVVKRADGSTFTFTALCRIDTVNELEYFLNGGILQYVLRKLAA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcatcggacaggacactctgggcacgcgcgacacgttgaatgtcggcggcaag
gacattgcctattattcgttgaagaaggccgcgcagaagctgggcgacgtatcccgcctg
cctttttcgatgaaggtgctgctggaaaatctgctccgtttcgaagatggcgtgaccgtg
accgccgaggatatccaggcgatcgtcgactggcagaatgaccggggcaaggctgagcgg
gaaatccagtatcgccccgcgcgcgtgctgttgcaggattttaccggggtgccctgcgtg
gtcgatctggccgcgatgcgcgacgcgatgaacgcgctgggcgccgacgccagcaagatc
aatccgcaggtgcccgtccacctcgtcatcgaccatagcgtcatggtcgacgagttcggc
acgcccaaggcgttcgagcagaatatggagatcgaatatcagcgcaatatggagcgctac
gacttcctgaaatggggcagcaagtccctcgccaatttctacgccgtgccgccgggcacg
ggcatctgccatcaggtcaatctggagaatatcgcgcagggcgtgtggtcttcggtcgat
gaaagcggcgccaccgtcgcctatcccgacacctgcgtcggcaccgacagccacaccacg
atggtcaatggcctgggcgtgctgggttggggcgtgggcgggatcgaggcggaggccgcg
atgctgggccagcctgtatccatgctgatccccgaagtcgtgggcttcaaattcaccggt
acgctgaaggaaggcgtgaccgccaccgacctggtgctgacctgcacccagatgctgcgc
gcgcgtggcgtggtggggcggttcgtcgaatatttcgggccgggtctggcgacgctgagc
ctcgcggaccgggcgactttggccaatatggcgccggaatatggcgcgacctgcggcttc
ttcggcatcgatgacaagacgctggactatatgcgtctgaccggtcgcccggacgagacg
atcgcgctggtcgaagcctatgccaaggagcaggggttctggatcgacccgtcgatcgaa
ccggtgttcaccgacacgttggaactggacctgtccaccgtcgtgcccagcctggccggg
ccgaagcgtccgcaggatcgggtcgcgctgcccgacgtcgatgacgtgttcaatgccgac
atggtcaatacctacaagaaggcacagacccgcgtgccggtggaaggcaaggatttcgac
attggcgacggcgacgtcaccatcgcggcgatcaccagctgcaccaatacgtcgaacccc
agcgtgctgatcgcggctgggctggtcgccaagaaggcgaacgagctgggcctgaagccc
aagccatgggtgaagacgtcgctggcgccgggtagccaggtcgtgaccgattatctggaa
aaggcggggttgcagtcgcatctggacgccatcggtttcaatctggtgggctatggctgc
accacctgcatcggcaattcggggccgctggcgcccgcgatcagcgctgcgatcaatgaa
aatgggctggtggccgccgccgtgatttcgggcaaccgcaatttcgaagggcgcgtgtcg
ccggacgtgcgcgccaacttcctcgcgtcgccgccgctggtggtcgcctatgcgctcaag
ggcacggtgatcgaggatttcctgaccacgccgatcggcgtcagcacggcgggtaacgac
gtgtatctcaaggacatctggccgaccaacgacgagattgcgaccaccatcgcgggcgcg
gtggaccggccgatgttccaggcgcgctatgccaatgtctataagggcgacgcgcattgg
caggcgatcgacgttaccggatcggacacctatcagtggcgcgcgggatcgacctatgtc
gccaatccgccctatttcgaggggctgagcatgactccggcgccggtcacggacattgtc
gaggccaagccgctggcgatcttcggcgattccatcaccaccgaccatatttcgccggca
gggtcgatcaaggcgtcgtcgccggccggcaaatggctgagcgagcatcaggtgagccag
gccgacttcaacagctacgggtcgcggcgcgggcatcatgaggtgatgatgcgcggcacc
ttcgccaatatccgcatcaagaatctgatgctggatggcgtcgagggcggcatgaccagt
tatgacggcgaggtcatgccgatctatgacgcggcgatgaagcataaggccgacgggacg
ccgctggtcgtgatcggcggcaaggaatatggcaccggatcgtcgcgcgactgggcggcg
aagggcaccaatttgctgggcgtgcgctcggtgatcgtggaaagcttcgagcgcatccat
cggtcgaacctggtcggcatgggcgtgttgccgctccagttcaaggatggcgacacgcgc
gatacgctgggtctgacgggggacgagacgttcaccattcagggcgtcgccgacctgaag
ccgcgtcaggatgtggatgtggtcgtgaagcgggccgatggttcgaccttcaccttcacc
gcgctgtgccgcatcgataccgtcaacgagctggaatatttcctgaacggcggcattttg
caatatgtgctgcgcaagctggccgcttga
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