Sphingobium sp. YG1: YGS_C1P1870
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Entry
YGS_C1P1870 CDS
T05858
Name
(GenBank) succinate dehydrogenase/fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00020
Citrate cycle (TCA cycle)
spyg00190
Oxidative phosphorylation
spyg00650
Butanoate metabolism
spyg00720
Other carbon fixation pathways
spyg01100
Metabolic pathways
spyg01110
Biosynthesis of secondary metabolites
spyg01120
Microbial metabolism in diverse environments
spyg01200
Carbon metabolism
Module
spyg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spyg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spyg_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YGS_C1P1870
00650 Butanoate metabolism
YGS_C1P1870
09102 Energy metabolism
00190 Oxidative phosphorylation
YGS_C1P1870
00720 Other carbon fixation pathways
YGS_C1P1870
Enzymes [BR:
spyg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YGS_C1P1870
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
Motif
Other DBs
NCBI-ProteinID:
BBD00615
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Position
1:complement(2017099..2018901)
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AA seq
600 aa
AA seq
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MTEAYKIIDHTYDTVVVGAGGSGLRATMGSAEAGLKTACITKLFPTRSHTVAAQGGIAAS
LGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYMVREAPAAVIELEHAGVPFSRNENGTIYQ
RPFGGHMQNMGAGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYIEYFAIDLIMENGE
CRGVIAICMEDGSIHRFRSHAVVLATGGYGRAYFSATSAHSCTGDGGGMVLRAGLPLQDL
EFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMAME
MREGRGVGEHKDHIFLHLDHIDPKVLAERLPGITESGKIFAGVDLTRQPLPVTPTVHYNM
GGIPCNYHGQVVTKVGDDPEVIVKGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGL
FLKDNLKPNAPHKALPADAADLALGRLDHYRNAKGSTPTADIRMDMQRTMQKHAAVFRDS
ALLSEGVTQMHAVNKRLQDVKVTDRSLIWNTDLIETLELDNLVSQAICTIESADARKESR
GAHAHEDFPDRDDENWMKHTVSWFEGWGGSGGKVTLDYRPVHDYTMTDEAEYVKPKARVY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcctataagatcatcgaccatacctacgacaccgtcgtcgtgggcgctggc
ggctccggcctgcgcgcgaccatgggcagcgccgaagcgggcctcaagaccgcctgcatc
accaagctgttcccgacccgcagccacaccgtggcggcacagggcggcatcgctgcgtcg
ctgggcaacaatagccccgaccactggacctggcacatgtacgacaccgtcaaggggtcg
gactggctgggcgatcaggacgcgatcgaatatatggtgcgtgaagcgccggcggccgtg
atcgagctggaacatgccggcgtaccgttcagccgtaacgagaatgggaccatctaccag
cgtcccttcggcggccacatgcagaatatgggcgccggcccgccggtgcagcgcacctgc
gccgcggccgaccgtaccggccacgccatgctgcacgcgctctatcagcaatcgctgaag
tacgacgcggacttctacatcgaatatttcgccatcgacctgatcatggaaaatggcgaa
tgccgtggcgtgatcgccatctgcatggaagatggcagcatccatcgcttccgcagccat
gcggtcgtgctggcaacaggcggctatggccgcgcatacttctccgccacatcggcgcat
agctgcaccggcgacggcggtggcatggtgctgcgcgcagggcttccgcttcaggatctg
gagttcgttcagttccacccgaccggcatctacggcgcgggcgtgctgatcaccgaaggc
gcgcgtggcgagggcggctacctcaccaattccgaaggcgagcgtttcatggaacgctat
gccccgtcggccaaggatctggcgtcgcgcgacgtcgtgtcgcgatcgatggcgatggaa
atgcgcgaagggcgcggcgttggcgagcataaggatcatatcttcctgcacctcgaccat
atcgatcccaaggtgctggccgaacgcctgccgggcatcaccgaaagcggcaagatcttt
gccggcgtcgacctgacccgccagccgctccccgtgacgccgaccgtccattacaatatg
ggcggcatcccctgtaactatcacggccaggtcgtgaccaaggtcggcgacgatccggaa
gttatcgtcaagggcctgttcgcggtcggcgaagcggcctgcgtgtcggtccatggtgcc
aaccgcctcggttccaactcgctgatcgaccttgtggtgttcggtcgtgccaccggcctg
ttcctcaaggataatctgaagcccaacgcgccgcacaaggcgctgccggccgatgccgcc
gatttggcgctgggtcgcctggaccattatcgcaatgccaagggttcgacgcccacggca
gacatccgcatggacatgcagcgtaccatgcagaagcatgccgccgtgttccgcgacagc
gcgctgttgtcggaaggcgtcacgcagatgcatgcggtcaacaagcggttgcaggacgtc
aaggtcaccgaccgttcgctgatctggaacaccgacctcatcgaaacgctggaactggac
aacctagtcagccaggcgatctgcacgatcgaaagcgccgacgcgcgtaaggaatcgcgc
ggcgcccatgcgcatgaggatttcccggaccgcgacgacgaaaactggatgaagcacacg
gtcagctggttcgaaggctggggcggttcgggcggcaaggtgacgctcgattatcgtccg
gtccacgactatacgatgaccgacgaagccgaatatgtgaagcccaaggcgcgcgtctat
taa
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