Sphingobium sp. YG1: YGS_C1P1903
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Entry
YGS_C1P1903 CDS
T05858
Name
(GenBank) 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00290
Valine, leucine and isoleucine biosynthesis
spyg00660
C5-Branched dibasic acid metabolism
spyg01100
Metabolic pathways
spyg01110
Biosynthesis of secondary metabolites
spyg01210
2-Oxocarboxylic acid metabolism
spyg01230
Biosynthesis of amino acids
Module
spyg_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
YGS_C1P1903
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
YGS_C1P1903
Enzymes [BR:
spyg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
YGS_C1P1903
4.2.1.35 (R)-2-methylmalate dehydratase
YGS_C1P1903
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Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
BBD00648
UniProt:
A0A2Z6AF93
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Position
1:complement(2042822..2044273)
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AA seq
483 aa
AA seq
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MVKSRTLYEKIWDAHVVERRPDGTCLIYIDRHLVHEVTSPQAFEGLRLAGRKVRRPDLTL
AVPDHNLPTTPRRDADGHRIPIADPESAQQLAALERNAPEFGVRLIGDADLEQGIVHVVG
PEQGFTLPGTTLVCGDSHTSSHGALGALAFGIGTSEVEHVLATQTLLLKQSKTMEVVVEG
VLAPGVTPKDVALAICGTIGTAGGTGYVMEYRGSVFRDMSIEGRLTVANMSIEAGARSGL
FAPDEKTFAYIEGRPMAPKGADFDAAVAYWRTLVTDEGAVFDKTVVIDAADIVPNVTWGT
SPEDVVAVTGVVPDPQSFADPSKQAAAQKSLDYMGLVAGQKMADVAIEHVFIGSCTNSRI
EDLRAAASLLKGRHVAAGIKHAMVVPGSGLVKQQAESEGLDRIFLDAGFEWREPGCSACL
GMNPDKVPAGERCASTSNRNFMGRQGPGSRTHLVSPEMAAAAAITGRLTDVRELLNKKEG
VVA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagtctcgcaccctctacgaaaagatctgggacgcgcacgtcgtcgaacggcgt
cccgatggcacctgcctcatctatatcgaccgccatctcgtccatgaagtgacgagcccg
caggcgttcgaggggctacgccttgccggtcgtaaggtgcgccggcccgatctgacgctg
gcggtgccggaccataatctgcccaccacgccgcgccgcgacgcggatggccatcgcatc
ccgatcgccgatccggaaagcgcgcagcagctggccgcgctggaacgcaatgcgcccgaa
ttcggcgtccgcctgatcggtgacgccgatctggagcagggcatcgtccatgtcgtcggc
ccggaacagggctttacgctgcccggcaccactttggtgtgcggcgacagccatacctcc
tcgcatggcgcgctgggcgcgttggccttcggcatcggcacgtcggaggtcgagcatgtg
ctggcgacccagacgttgctgctgaaacagtcgaagacgatggaagtcgtcgtcgaaggc
gtactggcgccgggcgtcacgcccaaggatgtggcgctggcgatttgcggtacgatcggc
acggcgggcggcaccggctatgtcatggaatatcgcggctcggtgttccgcgacatgtcg
atcgaagggcgtctgaccgtcgccaacatgtcgatcgaggcgggcgcacgatcgggcctg
ttcgccccggacgaaaagaccttcgcctatatcgagggtcgcccgatggcacccaagggc
gcggatttcgacgcggccgtcgcttattggcggacgctcgtcaccgacgaaggcgccgtc
ttcgataagaccgtggtgatcgacgcggccgacatcgtgcccaacgtcacctggggcacc
agcccggaagacgtcgtggccgtgaccggcgtggtgcccgatccgcagagcttcgccgat
ccgtccaagcaggccgccgcgcaaaagtcgcttgattatatgggcctcgtcgccgggcag
aaaatggccgatgtcgcgatcgagcatgtcttcatcggcagctgcaccaacagccggatc
gaggatctgcgcgccgccgcatcattgctgaaggggcgccatgtcgccgccggcatcaag
catgcgatggtcgtgcccggctccggcctggtcaagcaacaggccgaatccgaagggctg
gaccgcatcttcctggacgccggtttcgaatggcgcgagccgggctgctcggcgtgcctg
ggcatgaaccctgacaaggtgcccgcgggcgaacgctgcgcatcgaccagcaaccgcaat
ttcatgggccgtcaggggccgggatcgcgcactcatctggtgtcgcccgaaatggcggcg
gctgcggccatcaccggccggctgacggatgtgcgcgaactgttgaacaaaaaagagggt
gtggtcgcatga
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