KEGG   Sphingobium sp. YG1: YGS_C1P1977
Entry
YGS_C1P1977       CDS       T05858                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
spyg  Sphingobium sp. YG1
Pathway
spyg00300  Lysine biosynthesis
spyg00470  D-Amino acid metabolism
spyg01100  Metabolic pathways
spyg01110  Biosynthesis of secondary metabolites
spyg01120  Microbial metabolism in diverse environments
spyg01230  Biosynthesis of amino acids
Module
spyg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:spyg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    YGS_C1P1977
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    YGS_C1P1977
Enzymes [BR:spyg01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     YGS_C1P1977
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BBD00722
UniProt: A0A2Z6AFE9
LinkDB
Position
1:complement(2121039..2122304)
AA seq 421 aa
MDHFDYVNGAMQVEQVPLDAIADAVGTPVYVYSTATLERHVSVFREGLSALDNPLIAFAV
KANPNGAVLATLAKLGLGADVVSGGELLRAIAAGIPADRIVFSGVGKTAEEMRLALDEGI
YQFNLESEPEAEMLSQVALSMGKRAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDRAL
ESYAAARDLPGLDVQGVAVHIGSQLTDLAPLEAAFTKVGVLVEALRAAGHDIRTADLGGG
LGVPYDPSQPLPPSPADYGAMVCRVTQGWPVRLMFEPGRVIVGNAGALLSRVVRVKQGAQ
APFVIVDAAMNDLMRPSLYDAWHDIRAVKPTGVRETANVVGPVCETGDTFAMHRDMDVVQ
AGDLVAFMTAGAYGATMAGTYNSRPLTPEVLVSGDKWAVVRERPPLEALIAADIIPDWVG
N
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttggaccattttgattatgtgaacggcgccatgcaggtggagcaggtgccgctggacgct
atcgccgatgcggtcggtacgcccgtctatgtctattcgaccgcgacgctggagcgccat
gtcagcgtgttccgcgaagggctgagtgcgctcgacaatccgctgatcgcctttgcggtg
aaggccaatcccaatggcgcggtgctggcgacgttggcgaagctggggctgggcgcggat
gtggtgtcgggcggcgaattgctgcgcgcgatcgcggcgggcatcccggctgatcgcatc
gtcttttccggcgtcggcaagacggccgaggaaatgcggctggcgctggacgagggcatt
taccagttcaatctggaaagcgagccggaagcggaaatgctgtcgcaggtcgcgctgtcc
atgggcaagcgcgcgccggtcgcctatcgcatcaaccccgatgtggacgccggcacccat
gccaagatttcgaccggcaagtcggaaaacaagttcggcattccctatgaccgggcgctg
gaaagctacgcggcggcgcgcgatctgccaggcctggatgtgcagggcgtggccgtgcat
atcggcagccagctcaccgatctggctccgctggaggcggcgttcaccaaggtcggcgtg
ctggtcgaggcgttgcgcgcggcggggcatgacattcgcaccgccgatctgggcggtggc
ctgggcgtgccttatgacccgtcccagcctttgccgcccagccctgccgactatggcgcg
atggtgtgccgggtgacgcagggctggccggtgcgcctgatgttcgagccgggccgggtg
atcgtgggcaatgcgggcgcgctgctgtcgcgcgtggtgcgggtgaagcaaggcgcgcag
gcgcccttcgtgatcgtcgatgcggcgatgaacgacctgatgcgtcccagcctgtatgac
gcatggcatgatatccgggcggtaaagccgaccggtgtgcgcgaaaccgccaatgtcgtg
gggccggtgtgcgagacgggcgataccttcgccatgcaccgcgacatggatgtggtgcag
gccggcgatctggtcgccttcatgacggcgggcgcctatggcgcgaccatggcgggcacc
tataacagccggccgctgacgcccgaagtgctggtgtcgggcgacaaatgggcggtggtg
cgcgagcggccgccacttgaagcgctgatcgcggcggatatcattcccgactgggtcggt
aactga

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