Sphingobium sp. YG1: YGS_C1P2028
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Entry
YGS_C1P2028 CDS
T05858
Name
(GenBank) cysteinyl-tRNA synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YGS_C1P2028
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spyg01007
]
YGS_C1P2028
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spyg03016
]
YGS_C1P2028
Enzymes [BR:
spyg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
YGS_C1P2028
Amino acid related enzymes [BR:
spyg01007
]
Aminoacyl-tRNA synthetase
Class I (G)
YGS_C1P2028
Transfer RNA biogenesis [BR:
spyg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
YGS_C1P2028
Prokaryotic type
YGS_C1P2028
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
CysS_C
SSF
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
BBD00773
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All DBs
Position
1:2172061..2173563
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AA seq
500 aa
AA seq
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MSDDQHIAAPLRLFNSLTRTIEPFAPIEENHARVYSCGPTVYNYAHIGNLRAYVFTDTLR
RTLLWKGLAVTHIINITDVGHLTSDADAGDDKMEAAARASAKSIWDIAAHYTQAFKSNIA
DLNIIAPSEWTVATDYVPQMIAFAEKIAPDHCYELDSGLYFDSSSVPDYGALAGGRDDAA
HARIDPVAGKRNASDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSQARLGQPFD
IHTGGIDHREIHHPNEIAQNQAYCGCTDAQPGFTGSRWWMHNNFLVDRQGKMSKSKGGFT
TLFSLIDAGVHPIAYRLLCLGAHYRSELEFSADNLAAALTRLKRLVMGVEGLKARAEGVT
WQSPRIDYLRANLHPKLAPLLEQFDAAIADDLMTPRALPLLEEAIGMKKVPVDEKLCLIA
AFDQALGLNLLTLSRADLRVQPKEATITPDEIEAELERRTAARADKDFALSDDIRDALLA
RGVEVMDGDPLRWDWRLTLA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaccagcatatcgccgcgccgctgcgcctgttcaacagcctgacccgcacg
atcgagccgtttgcgccgatcgaggagaaccatgcgcgcgtctatagctgcggcccgacc
gtctataattatgcccatatcggcaatctgcgggcctatgtcttcaccgacacgctgcgc
cggacgttgttgtggaaggggctggccgtgacccacatcatcaacatcaccgatgtcggc
cacctgaccagcgacgccgacgcaggcgacgacaagatggaggccgctgcccgggccagc
gccaagagcatctgggacatcgcggcccattatacgcaagcgttcaagtccaacatcgcg
gacctcaacatcatcgcgcccagcgaatggacggtcgcgaccgactatgtgccgcagatg
atcgcctttgccgaaaagattgcgccggatcattgctacgaactggacagcggcctctat
ttcgacagcagcagcgtgcccgattatggcgcgctggccggcggtcgagatgacgccgcg
cacgcgcggatcgatccggtcgcgggcaagcgcaacgcatccgacttcgcgatctggcgc
aagtccccgcccggcgaacagcgccagatggaatgggacagcccatggggcaagggtgcg
ccgggctggcatctggaatgctcggtcatgtcgcaggcccgccttggccagccattcgat
atccataccggtggcatcgaccatcgcgagattcatcatccgaacgaaatcgcccagaat
caggcctattgcggttgcaccgatgcgcagcccggcttcaccgggtcgcgctggtggatg
cacaataatttcctggtggatcgccagggcaagatgtcgaagtcgaagggcggcttcacc
acgctcttctctctgatcgacgcgggcgtgcatccgatcgcctatcgcctgctgtgcctg
ggcgcccattaccggtcggaactggaattcagcgccgacaatctggcagcagccctcacc
cgtctcaagcgacttgtgatgggcgtcgagggtttgaaggcgcgcgccgagggtgtgacg
tggcaatcgccgcgcatcgactatctgcgggccaatctgcaccccaagctggcgccgttg
ctggagcaattcgacgccgcgatcgctgacgacctgatgacgccgcgcgccctacctctg
ctggaggaagccattggcatgaagaaggtgccggtggacgagaaactctgcctgatcgcc
gctttcgaccaggcgctaggcctcaacctgctgacgctcagccgcgcagacctgcgtgtc
cagccgaaggaggcgacgatcacgccggatgagatcgaggcagaactggaacgccgtacc
gccgcccgtgccgacaaggattttgccctgtcggacgacattcgtgacgccctgctggcg
cgtggggtcgaggtgatggacggcgatccgctgcgctgggactggcggctgacgctggcc
tga
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