KEGG   Sphingobium sp. YG1: YGS_C1P2118
Entry
YGS_C1P2118       CDS       T05858                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
spyg  Sphingobium sp. YG1
Pathway
spyg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:spyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    YGS_C1P2118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spyg03400]
    YGS_C1P2118
Enzymes [BR:spyg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     YGS_C1P2118
DNA repair and recombination proteins [BR:spyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     YGS_C1P2118
 Prokaryotic type
     YGS_C1P2118
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: BBD00863
UniProt: A0A2Z6AFU0
LinkDB
Position
1:2261669..2262382
AA seq 237 aa
MSDTIKLDESWRAPLAEQFAAPHMQGLKSFLQAEKAAGKRIFPKGNEYFRALDLTPLDQV
KVVILGQDPYHGEGQAHGLCFSVQPGVRTPPSLVNIYKEMETDLGIPRARHGFLEHWAKQ
GVLLLNSVLTVEMSRAASHQGKGWELFTDAIVRLVAQKEEPVVFLLWGAYAQRKASFVDQ
SRHLVIKSAHPSPLSAHNGFLGSRPFSKANAFLEANGRGAIDWALPELDGVQPGLSL
NT seq 714 nt   +upstreamnt  +downstreamnt
atgagcgataccatcaagctggacgaaagctggcgcgcgccgctggccgaacaatttgcc
gccccgcatatgcagggcctcaaaagctttcttcaagccgaaaaggcggcggggaaacgc
atcttccccaagggcaacgaatattttcgtgcgctggacctgacaccgctggaccaggtc
aaggtggtgatattggggcaagacccctatcatggtgaaggacaggcgcatggcctttgc
ttttcggtgcagccgggcgtccgcacgccgccgtccttggtcaacatctacaaggagatg
gagacagacctgggcatcccgcgcgcacgccacggctttctggaacattgggcgaagcag
ggcgtgctgctgctgaacagcgtgctgacggtcgagatgagccgcgccgcatcgcatcag
ggcaagggctgggaattgttcaccgacgcgatcgtccgcctcgtcgcacagaaagaggaa
ccggtcgtcttccttttgtggggcgcctacgcccagcgcaaggccagcttcgtcgaccag
agccgccatctggtgatcaagtccgcccacccctctcctctgtccgcacataatggcttt
ctgggatcgcggcctttttccaaggctaatgccttcttggaagccaatgggcgcggcgcg
atcgactgggcgctgccggaactggacggcgtgcagccgggcctgtccttatag

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