KEGG   Sphingobium sp. YG1: YGS_C1P2377
Entry
YGS_C1P2377       CDS       T05858                                 
Name
(GenBank) type IV secretion system protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
spyg  Sphingobium sp. YG1
Pathway
spyg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:spyg00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YGS_C1P2377
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spyg02044]
    YGS_C1P2377
Enzymes [BR:spyg01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     YGS_C1P2377
Secretion system [BR:spyg02044]
 Type IV secretion system
  Trb secretion system protein
   YGS_C1P2377
SSDB
Motif
Pfam: T2SSE Mg_chelatase Zeta_toxin nSTAND3 FtsK_SpoIIIE DEAD TrwB_AAD_bind GTP_EFTU AAA_16 AAA_28 CbiA ATPase AAA_29 ResIII Dynamin_N AAA_19 AAA_7 MobB ATPase_2 CPT CLP1_P ABC_tran IstB_IS21 KTI12 P-loop_TraG
Other DBs
NCBI-ProteinID: BBD01122
UniProt: A0A2Z6AGH8
LinkDB
Position
1:2541077..2542096
AA seq 339 aa
MMSAQTTSVSAERRRAMLRTAMGPAIAAALSDSRVIEIMVNPDGALRVDILGEGRVDTDV
KLDPAQVERIIRLVASHVRSEVHGDKPIVSAELPPLGSGAGERFEGILPPVSTAPCFSIR
KPAARIYTLKDYVTDGIMSAEAARLLSVAVVDRRNILVAGGTSSGKTTLANALLAEMADL
DERVILIEDTRELQSPARDTVALRTRPSSSDKNTAVTMGDLVRSTLRLRPDRIIVGEVRG
GEALDMLKAWNTGHPGGIATVHANSAASALYRIEQLIQESVVIVPRHLVAEAINIIVFIA
GRGTARRIETIACVAGLDPDGGYAVVDLFPDPNHDFEGD
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgatgtccgcccagacgacaagcgtctccgcggaacgccgccgtgccatgctgcgcacc
gcaatgggaccggcgattgccgccgcgctttccgacagccgtgtgatcgagatcatggtc
aatcccgacggtgcgctgcgggtcgacattctcggcgaaggccgtgtcgataccgacgtg
aagctcgatccggcccaagtcgagcggatcattcggctggtggcatcccatgtccgatcc
gaagtccatggcgacaaacccatcgtgtcggccgaactgccgccacttggttctggcgcc
ggggagcggttcgagggaatcctgccgcccgtttcgaccgccccgtgcttttctatccga
aaacctgccgcccgcatctacacgctgaaggactatgtgaccgacggcattatgtcggcg
gaggccgcgcgcctgctatcggtcgccgtcgtcgatcgccgcaacatcctcgtcgcgggt
gggaccagttcgggtaagaccacgctcgccaacgcgttgctggccgagatggcggatctc
gacgaacgggtgatcctgatcgaggatacccgcgagctgcaatcgccggcgcgtgacacc
gtggcgctcaggacccggccaagctcatctgacaagaacaccgccgtcaccatgggcgat
ctcgtgcgctcgacgctgcgccttcgacccgatcgcatcattgtcggcgaggtccggggc
ggcgaagcattggacatgctcaaggcctggaacaccggccatcctggcggaatcgcgacc
gtccatgcgaacagcgccgcttccgcgctctaccggatcgagcagctcatccaggaatcc
gtggtcatcgtgccgcgccacctggtcgccgaggcgatcaacatcatcgtcttcatcgcc
ggccgcggcaccgcgcggcggatcgagacgatcgcctgcgtcgcgggcctcgaccccgat
ggcggctatgccgtcgtcgatctcttcccagaccccaaccacgactttgaaggagactga

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