KEGG   Sphingobium sp. YG1: YGS_C1P2380
Entry
YGS_C1P2380       CDS       T05858                                 
Name
(GenBank) type IV secretion system protein TrbE
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
spyg  Sphingobium sp. YG1
Pathway
spyg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:spyg00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YGS_C1P2380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spyg02044]
    YGS_C1P2380
Enzymes [BR:spyg01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     YGS_C1P2380
Secretion system [BR:spyg02044]
 Type IV secretion system
  Trb secretion system protein
   YGS_C1P2380
SSDB
Motif
Pfam: P-loop_TraG CagE_TrbE_VirB AAA_10 AAA_16 AAA_22 HerA_C ABC_tran AAA_29 FtsK_SpoIIIE DUF87 TraG-D_C T2SSE AAA_7
Other DBs
NCBI-ProteinID: BBD01125
UniProt: A0A2Z6AGP2
LinkDB
Position
1:2542699..2545137
AA seq 812 aa
MLNLAEYRSRADRLADHLPWAALVAPGIILNKDGSFMRSFAFRGPDLESATEAELVSACA
RANNVLKRLGSGWALFFEAERREALGYPESAFPDAASWLVEQERRAGFEAEGQHFESVFH
GTLVWLPPADSSDAAGRTLVERPDDAKGRDWHASLAGFIAETDRVFDLLSGFMPEVRPLS
DAETLTYLHGTVSSRRHPVAVPETPIYLDALLADTPLVGGLEPKLGDRHLRTLTVLGFPN
LSRPGILDALNLSDFGYRWVTRFIALDKTDATKALTKIRRQWFNKRKSITALLREVMYNQ
PVQLLDTDADNKVVDADLALQALGGDHVAFGYLTTTITVSDVDRTSAEDKVRAVERIVNG
LGFTAKREGVNAVEAWLSSLPGQAYANVRQPLVHTLNLAHLMPLSSVWAGPTDNHHLGGP
PLLYAQTSGSTPFRLSTHVGDVGHMLVVGPTGAGKSVLLALIALQFRRYPGSQLYIFDKG
YSARAAVLAMGGAHHALGLGADSGDALAFQPLRRIDDQSERSWAAEWIAALLAHEKVVVT
PEVKDAVWSALGSLASAPPEERTLTGLAMLLQSNALRTALTSYTLDGPYGRLLDAAEQNL
ALADVQCFETESLMGQAGVVAPVLTYLFHRLEERFDGRPTLLVLDEAWIFLDHPLFAARI
REWLKTLRKKNVAVLFATQSLADIADSSIAPAIIESCPQRILLPNDRAIEPQSRAAYERF
GLNDRQIELVSRATPKRHYYLQSARGNRLFELGLGPIALALCGASDPVTQTRIDALLAEH
GPEDFATRFLEGSGLDWAASLLADFPVPQAKE
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgctgaacctagcggaataccggtcgcgcgccgaccggctggccgaccatctgccctgg
gccgcgctggtcgcacccggcattatcctcaacaaggacggcagcttcatgcggtccttc
gcctttcgcggtcctgatctcgaaagcgcgacggaagcggaactggtgtcggcctgcgcc
cgggcgaacaacgtcctcaaacggcttggctcgggctgggccttgttcttcgaggccgaa
cggcgtgaggcgctcggctatcccgagagtgcctttcccgacgcagcgtcctggctggtc
gagcaggagcggcgtgctgggttcgaagccgagggccagcatttcgagagtgtctttcac
ggcacgctggtctggttgccacccgcggacagcagcgatgcggcgggacggacgctggtc
gagcggcctgacgacgcgaagggccgggactggcacgccagcctcgccggttttatcgcc
gagaccgatcgtgtgttcgacctcctgtcgggcttcatgcccgaggtgcggcccttaagc
gacgccgagacgctgacctatctccacggcaccgtttccagccgccgccatccggtcgcc
gtgccggagacaccgatctatcttgatgcgctgctcgccgatacgccgctggtcggcggg
ttggagcccaagcttggagaccgccatctgcgaaccctgacggtgttgggattcccgaac
ctcagccggcccggcatcctcgacgcgctcaacttatcggatttcggctaccgctgggtc
acgcgtttcatagcgctcgacaagaccgatgcgaccaaggcgctgacgaagatccgccgg
caatggttcaacaagcgtaagtcgatcacagcactgctgcgcgaggtgatgtacaaccag
ccggtccagcttctcgacaccgacgccgacaacaaggtcgtcgatgccgatctcgcgctg
caggcgcttggcggcgatcacgtcgccttcggctatctgacgacgacaatcacggtgtcg
gacgtcgaccgcaccagcgccgaggacaaggtccgcgcggtcgagcggatcgtcaatggc
ctcggcttcacggcgaagcgcgagggcgtcaacgcggtcgaagcgtggctgtcgtcgctg
cccggccaggcctacgccaatgtgcgccagccgctggtccatacactaaacctcgcccat
ctcatgccgctttcgtcggtctgggcaggaccgacggacaaccaccatctcggcggaccg
ccgttgctctacgcccagaccagcggatcgaccccgtttcgcctttccacacatgtcggc
gatgtcgggcatatgctcgtcgtcggcccgactggcgcgggcaagtcggtgttgctggcg
cttatcgcactccaattccggcgctatcccggctcccagctctatatcttcgacaagggc
tattcggcgcgtgcggcagtcctggcgatgggcggcgcgcatcatgccctcgggcttggc
gcggacagcggtgacgccctcgcgttccagccgctccgccgcatcgatgatcaaagcgaa
cgcagttgggcagcggaatggatcgcggcgctgctggcgcacgaaaaggtggtcgtcacg
cccgaagtgaaggatgcagtttggtcggcgctgggcagtctcgcatcggcaccgcccgag
gagcgcaccctgaccgggctcgccatgctgctccaatcgaatgcgctgcgcaccgcactc
acctcctatacgctcgacggcccctatggtcggctcctcgacgcggccgagcagaatctt
gcccttgccgacgtccaatgcttcgagaccgagtcgctgatgggacaggccggcgtggtc
gccccggtgctgacctacctgttccaccggctcgaggagcgtttcgacggtcggccaacg
ctgctggtgctcgacgaggcctggatcttcctcgaccatccgcttttcgccgcgcgcatc
cgcgaatggctgaagacgctgcgcaaaaagaatgtcgcggtgctgttcgcgacccagagt
ctcgccgacatcgccgacagcagcatcgcgcccgccatcatcgaaagctgcccgcagcgc
atattgctgcccaacgaccgcgcgatcgaaccgcagtcccgcgccgcctatgagcggttc
ggcctcaacgaccggcaaatcgaactggtaagtcgcgccacgccaaagcggcattattac
ctgcaatccgcacgcgggaatcgcctgttcgaactgggcctcggtccgattgcgctcgcc
ctgtgcggcgcatccgatcctgtgactcagacgcggatcgacgccctgctggccgagcat
ggcccggaggatttcgcgacccgcttccttgaaggaagcgggctcgattgggccgccagc
ctcctcgccgactttcccgtcccccaagccaaggagtaa

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