Sphingobium sp. YG1: YGS_C1P2427
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Entry
YGS_C1P2427 CDS
T05858
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00061
Fatty acid biosynthesis
spyg00071
Fatty acid degradation
spyg01100
Metabolic pathways
spyg01212
Fatty acid metabolism
spyg02024
Quorum sensing
spyg04146
Peroxisome
Module
spyg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
YGS_C1P2427
00071 Fatty acid degradation
YGS_C1P2427
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
YGS_C1P2427
09145 Cellular community - prokaryotes
02024 Quorum sensing
YGS_C1P2427
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spyg01004
]
YGS_C1P2427
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spyg04147
]
YGS_C1P2427
Enzymes [BR:
spyg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
YGS_C1P2427
Lipid biosynthesis proteins [BR:
spyg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
YGS_C1P2427
Exosome [BR:
spyg04147
]
Exosomal proteins
Exosomal proteins of breast milk
YGS_C1P2427
Exosomal proteins of breast cancer cells
YGS_C1P2427
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BBD01172
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All DBs
Position
1:complement(2584040..2585818)
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AA seq
592 aa
AA seq
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MRAIEKFPNLVTMFFARAQEKGDASFLWRKSGGQWHSQSWTEVAGQVASLAAALKAQGLK
PGDPVMLVSENRPEFCIADLAIMAAGCITVPTYTTNTTRDHQHILTDSGARAVIVSTAKL
AQALMPAVVRSQASFIIGMEPLRGAQGTCACHLWSDLLAAYPADVDAIAAAQTVSRNDQA
CIIYTSGTGGAPRGVMQHHGAILSNVEGAGKVVAEDFGWGDEVFLSFLPLSHAYEHSAGQ
FLPMLLGGQIYYSEGLEKLASNIEETRPTIMVVVPRLFEVLRTRIIKSIEKQGKFPTYLM
GQATRIAAKEQAGKGSILDLPMKALLSRTLVPKIRARFGGRMKALVSGGAPLNPDVGLFF
DAMGLTLLQGYGQTEAGPIISCNYPSAGIAMDTVGPPLDGVEVKIADDGEILVRGELVMH
GYWRNPAETEKALKDGWLHTGDIGEIDAKGRIRITDRKKDLIVNDKGDNVSPQKVEGMLT
LQSEIGQAMVHGDRRPYLVGLLVPDAEWTREWAIEQGVALDSVAANPAYQAALRAAVDRV
NDDLSVLERVRRFILADEPFTIENEEMTPSMKIRRHVIRKRYADRLDALYKG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ttgagggccatcgagaaattccccaatctggtaacgatgttctttgcgcgcgcgcaggaa
aagggcgacgcgtccttcctctggcgcaagagcggcggccaatggcatagccagagctgg
accgaggtcgcgggccaggtcgcctcgcttgccgccgcgctgaaggcgcaggggttgaag
cccggcgatccggtgatgctggtcagcgaaaaccggcccgaattctgtatcgcggacctc
gccatcatggcggccggctgcatcaccgtgccgacctacaccaccaacaccacgcgcgat
caccagcatatcctgaccgacagcggcgcgcgcgccgtgatcgtgtccaccgcgaagctg
gcacaggcgctgatgcccgccgtcgtccgatcgcaggcgtccttcatcatcggcatggaa
ccgctgcggggcgcgcagggcacttgcgcctgtcatttgtggagcgacctgctcgccgcc
tatccggccgatgtggacgcgatcgccgccgcccagaccgtgtcccgcaacgatcaggcc
tgcatcatctacaccagcggcaccggcggcgcgccgcgcggcgtgatgcagcatcatggg
gcgatcctttccaacgtggaaggcgcgggcaaggtggtggcggaggatttcggctggggt
gacgaggttttcctctccttcctgccgctctcccacgcttatgaacatagcgccggtcag
ttcctgccaatgctgctgggcgggcagatctattattccgaaggcctggaaaagctggca
tccaatatcgaggaaacgcgcccgaccatcatggtcgtggttccgcgcctgttcgaagtg
ctgcgtacccgcatcatcaagtcgatcgagaagcagggcaaattccccacctatctgatg
gggcaggcgacgcgcatcgcggcgaaggagcaggcgggcaagggatcgattctcgatctg
ccgatgaaggcgctgctgtcgcgcacgctcgtccccaagattcgcgcgcgcttcggtggt
cggatgaaggctctggtgtcgggcggcgcgccgctcaaccccgatgtcggcctcttcttc
gacgccatgggtcttaccttgttgcaaggctatggtcagacggaggctggtccgatcatc
agttgcaactatccgtcggccggcatcgccatggacacggtcggcccgccgctcgacggg
gtggaggtgaagattgccgacgatggcgagattctcgtacgcggcgaactggtgatgcat
ggctattggcgcaacccggccgaaaccgagaaggcgctcaaggacgggtggctgcacacc
ggcgacatcggtgagatcgacgccaagggccgcattcgcatcaccgaccgcaagaaggat
ctgatcgtcaacgacaagggcgacaatgtctccccgcaaaaggtcgagggcatgttgacg
ctgcaaagcgagatcggtcaggcgatggtccatggcgaccgccgcccctatctggtcggg
ctgctggtgcccgatgccgaatggacccgcgaatgggcgatcgaacagggtgtggcactg
gacagcgttgccgccaatcccgcctatcaggcggcgctacgcgcggcggtggaccgggtg
aatgacgatctgtcggtgctggagcgcgtccgtcgcttcatcctggccgacgaacctttc
accatcgaaaatgaggaaatgaccccctcgatgaagatccgccgccatgtgatccgcaaa
cgctatgcggatcgcctggacgcgctgtacaagggctaa
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