Sphingobium sp. YG1: YGS_C1P2654
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Entry
YGS_C1P2654 CDS
T05858
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00730
Thiamine metabolism
spyg01100
Metabolic pathways
spyg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
YGS_C1P2654
Enzymes [BR:
spyg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
YGS_C1P2654
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BBD01399
UniProt:
A0A2Z6AHK5
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All DBs
Position
1:2817385..2819358
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AA seq
657 aa
AA seq
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MADVPARTEMPEAEGFIGRQAAMPEAEGFIGRQAAMTVTTGPIRGSKKIHVGPRKVAMRE
IHLEPGSGEPPVRVYDTSGPYTDPDARIDIMAGLQQLRRDWIIERGDVEDYDARAIKPED
NGLKGPDRSGGVQPFPNLVKRPLRAKPGANVSQMHYARRGIITPEMEYVAERENLGRARL
AEYVRDGESWGASIPDYVTPEFVRDEVARGRAIIPSNINHPESEPMAIGRNFLVKINANI
GNSAVASDVAAEVDKLVWSIRWGADTVMDLSTGRNIHDTREWILRNSPVPIGTVPIYQAL
EKVGGIAEDLTWDVFRDTLIEQAEQGVDYFTIHAGVRLAYIPMAAKRVTGIVSRGGSIMA
KWCLAHHRESFLYEHFDEITEIMKAYDIAYSLGDGLRPGSIADANDEAQFSELYTLGELT
HRAWKQDVQVMIEGPGHVPMHKIKQNMEKQLQVCGEAPFYTLGPLTTDIAPGYDHITSGI
GAAQIGWYGTAMLCYVTPKEHLGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAQVRDDAL
SRARFEFRWRDQFNLSLDPETAEHYHDQTLPAEGAKSAHFCSMCGPKFCSMKITQEVRDF
AAKKNQPADGFLEAGLTGAEVAQASKAAALKGMEEMSRLFKATGSELYMGAGGREHD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtccccgcccgcacagaaatgcccgaagccgaaggcttcatcggccggcag
gccgcaatgcccgaagccgaaggcttcatcggccggcaggccgcaatgaccgtcaccact
ggtcccattcgcgggtcgaagaagatccatgtcggcccgcgcaaggtcgcaatgcgcgag
attcatctggagccgggcagcggcgagccgccggtgcgcgtctatgacacgtctggaccc
tataccgatcccgatgcgcggatcgacatcatggcgggccttcagcaattgcgccgcgac
tggataatcgagcgcggcgatgtggaagactatgacgcccgcgcgatcaagccggaggat
aatgggctcaaggggccggaccgctcaggcggcgtccagccattcccgaatctcgtaaag
cggcccctacgtgccaagcccggcgccaatgtctcccagatgcactatgcccggcgcggt
atcatcacgccggaaatggaatatgtcgcggagcgcgagaatctgggccgcgcgcgcctc
gccgaatatgtccgcgacggcgaaagctggggcgcgtccatccccgactatgtcaccccc
gaattcgttcgggacgaagtcgcccgcggccgcgccatcatcccgtcgaacatcaaccac
ccggaatccgaaccgatggcgatcggccgcaatttcctggtgaagatcaacgccaatatc
ggcaacagcgcggtcgcctccgacgtcgcggccgaagtcgacaagctggtctggtcgatc
cgctggggcgcggacacggtgatggacctgtccaccggccgcaacatccacgacacgcgc
gaatggatcttgcgcaactcgccggtcccgatcggcaccgtccccatctatcaggcgctc
gaaaaggtcggcggcatcgccgaggatctgacatgggacgttttccgcgacacgctgatc
gagcaggcggaacagggcgtcgattatttcaccatccatgccggcgtgcgcctggcctat
atcccgatggcggccaagcgcgtcaccggcatcgtctcgcgcggtggttccatcatggcg
aaatggtgcctcgcccatcatcgcgaaagcttcctctacgagcatttcgacgaaatcacc
gagatcatgaaggcttatgacatcgcctacagcttgggcgacggcctgcgccccggctcc
atcgccgacgccaacgacgaagcgcaattttccgaactctacacgctgggcgaactgacc
caccgcgcctggaaacaggatgtgcaggtgatgatcgaagggccgggccatgtgcccatg
cacaagatcaagcagaatatggaaaagcagctgcaagtctgcggcgaagcgcccttctat
acgctcgggccgctcaccaccgacatcgcgccgggctacgaccatatcaccagcggcatc
ggcgcggcgcagatcggttggtatggcacggcaatgctttgctatgtcacgcccaaggag
catctgggcctgcccgaccgcgacgacgtgaaggtcggcgtggtgacgtacaagctggcc
gcccacgccgccgacctagccaagggccatcccgcagcgcaggtccgcgacgacgcactc
agccgcgcgcgcttcgaattccgctggcgcgaccagttcaacctgagcctggatcccgaa
accgccgaacattatcacgaccagacgctcccggccgaaggcgccaagagcgcgcatttc
tgctccatgtgcggccccaaattctgctcgatgaagatcacgcaggaagtccgggatttc
gcggccaaaaagaaccagcccgccgacggcttcctggaagcgggcctgaccggcgcggaa
gtggcgcaagccagcaaggccgccgcgctcaagggcatggaagagatgagcaggctcttc
aaggccaccggcagcgaactctatatgggcgctggcggtagggagcatgattga
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