Sphingobium sp. YG1: YGS_C1P2687
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Entry
YGS_C1P2687 CDS
T05858
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YGS_C1P2687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C1P2687
Enzymes [BR:
spyg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
YGS_C1P2687
DNA repair and recombination proteins [BR:
spyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YGS_C1P2687
Prokaryotic type
YGS_C1P2687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
BBD01432
LinkDB
All DBs
Position
1:complement(2857706..2858773)
Genome browser
AA seq
355 aa
AA seq
DB search
MRVEGRDRKIAGDLLAHYDVHARRLPWRAPPGSNAADPYRVWLSEVMLQQTTVAAVGPYF
AKFTERWPTVQDLAAAEDADLMAAWAGLGYYARARNLLACARAVARDHGGIFPDTEDGLR
ALPGVGAYTAAAVAAIAFGRRAVVVDANVERVVARLFAIATPLPAARPAIREACDRITPD
ARAGDFAQAMMDLGATICTARNPACGICPIRADCAAILTADPAAYPVKPPKKTRPHRTGH
GWWIERDGNVWLIRRPDKGLLGGMRALPSSDWSDAPDATPPLRAHWSTIDEPVAHVFTHF
SLALRVHHAHVGAEMTPPGAGEWWPIDRIGEAGLPTLFARAADAVRKERQANARN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgagggtagagacagaaaaatcgcgggcgacctgctcgctcactatgatgtg
catgcccggcgcctgccctggcgcgcgccgcccggcagcaacgccgccgacccctatcgg
gtctggctgtcggaagtgatgctgcaacagacgacggtggccgccgtcggcccctatttc
gcgaaattcacggaacgctggccgacggtgcaggatctggccgccgccgaagacgccgac
ctgatggccgcctgggccgggcttggctattatgcccgcgcccgcaacctgctcgcctgt
gcgcgggcggtggcacgcgatcatggcggcatcttccccgataccgaggacggactgcgc
gctctacccggcgtgggcgcctataccgccgccgccgtcgccgcgatcgcctttggccgg
cgcgcggtggtggtggacgccaatgtcgagcgggtggtcgcccgcctcttcgcgatcgcc
acgcccttgcccgccgcccggcccgccattcgcgaagcctgcgaccgcatcacccccgac
gcccgcgccggcgacttcgcgcaggcgatgatggatctgggcgcgaccatctgcaccgcc
cgcaaccccgcctgcggcatctgcccgatccgcgcggattgcgccgccatactgaccgcc
gatcctgccgcttatcccgtcaagccgcccaagaaaacgcgcccccatcgcaccggccat
ggctggtggatcgagcgggatggcaatgtctggctgatccgccgtccggacaaggggctg
ctgggcggcatgcgcgcgcttcccagctccgactggagcgacgcgcccgacgccactccg
ccgctgagggcgcactggtcgaccatcgatgagccggtcgcgcatgtcttcacccatttc
tcactagcgctgcgcgtccaccatgcccatgtgggggcggagatgacgccgccgggcgca
ggcgaatggtggccgatcgatcggatcggggaggcaggattgccaacattattcgcccgc
gcggccgatgcggtgaggaaggaaaggcaagccaatgcacggaactga
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