Sphingobium sp. YG1: YGS_C1P2711
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Entry
YGS_C1P2711 CDS
T05858
Name
(GenBank) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00270
Cysteine and methionine metabolism
spyg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
YGS_C1P2711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spyg03000
]
YGS_C1P2711
03032 DNA replication proteins [BR:
spyg03032
]
YGS_C1P2711
03036 Chromosome and associated proteins [BR:
spyg03036
]
YGS_C1P2711
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
spyg02048
]
YGS_C1P2711
Enzymes [BR:
spyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
YGS_C1P2711
Transcription factors [BR:
spyg03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
YGS_C1P2711
DNA replication proteins [BR:
spyg03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
YGS_C1P2711
Chromosome and associated proteins [BR:
spyg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
YGS_C1P2711
Prokaryotic defense system [BR:
spyg02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
YGS_C1P2711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_31
HTH_3
HTH_28
HTH_23
HTH_Tnp_1
HTH_29
HTH_19
HTH_26
MerR
HTH_24
HTH_AraC
HTH_17
HTH_8
HTH_7
HTH_25
Motif
Other DBs
NCBI-ProteinID:
BBD01456
LinkDB
All DBs
Position
1:complement(2893350..2894573)
Genome browser
AA seq
407 aa
AA seq
DB search
MQNEFATLRAQAGISIEELANRLGYSPRQLYRWERGDGAPRRAALNMLQNMAGGSATGFG
ESRFNFIDLFAGIGGIRKGFDAIGGHCVFTSEWNKYSQQTYAANFRDNHALHGDITTIKT
HEIPDHDVLLAGFPCQPFSIAGVSKKNSLGRQHGFLDETQGTLFFDVARVLRDKRPAAFM
LENVKNLTSHDKGRTFQVILKTLTEELGYKVWHKVIDAKHFVPQHRERIVIVGFREDVPF
SWEDLDLPEKGSVKLKDILHPGDGTEKAEGAYTLGPDAIVNGKYTLTDKLWQYLQGYADK
HKAAGNGFGFGLVTPDDVARTLSARYYKDGSEILISQGKKSNPRRLTPRECARLMGYGDD
FRIPVSDTQAYKQFGNSVAVPVFHEVARIMQPHIQSLVEAGQRREAA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgaattcgcaacgctccgtgcacaggcaggcatttctatcgaggagctggcg
aaccgtctgggctacagcccccgtcagctgtaccggtgggagcggggcgatggcgcgccc
cgtcgtgctgcgctgaacatgctccagaatatggctggcggatcggcaacgggctttggc
gagagccgcttcaatttcatcgatctgttcgcagggatcggcggcatccggaagggattt
gacgccatcggcgggcactgcgtgttcacgtcggaatggaataaatattcccagcagacc
tatgctgcaaatttccgcgataatcatgcgctgcatggcgatattaccacgatcaaaacc
catgagattcctgaccatgacgtgctgctggccggcttcccctgtcagcccttctccatt
gcgggcgtttccaagaaaaactccctgggtcgccagcatggttttctcgatgaaacacag
ggcacgctgttcttcgatgtggcgcgcgttctgagggacaagcggcctgccgccttcatg
ctggagaatgtcaagaatctgaccagccatgacaagggccggaccttccaggtgatcttg
aaaacgctcaccgaagagcttggctacaaagtctggcacaaggtgatcgatgcgaagcat
ttcgtgcctcagcaccgggagcgcatcgtcattgtcggcttccgtgaggacgtgccgttc
agctgggaggatctggacctgccggagaagggctctgtgaagctgaaggacattcttcat
cccggcgacgggacggagaaagccgaaggggcttacacccttggtccggacgcgatcgtc
aacggcaaatatacgctcaccgacaagctctggcagtatcttcagggctacgccgacaag
cataaggccgcgggcaatggcttcggtttcgggctggtgacgccggacgatgtggcccgg
actctgtcggcccgttattataaggacggatcggagatcctcatcagtcagggaaagaag
tcgaacccgcgccgtctgaccccgcgcgagtgcgcccgcctgatgggctatggagacgat
ttccgtatcccggtctcggatacgcaggcctataagcagttcggtaattcggtcgctgtt
ccggtgttccatgaggttgcccggatcatgcagccgcatatccagtctctggtcgaggca
gggcagcgacgcgaagctgcctga
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