KEGG   Sphingobium sp. YG1: YGS_C1P2729
Entry
YGS_C1P2729       CDS       T05858                                 
Name
(GenBank) type IV secretion system protein TrbE
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
spyg  Sphingobium sp. YG1
Pathway
spyg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:spyg00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YGS_C1P2729
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spyg02044]
    YGS_C1P2729
Enzymes [BR:spyg01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     YGS_C1P2729
Secretion system [BR:spyg02044]
 Type IV secretion system
  Trb secretion system protein
   YGS_C1P2729
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_16 AAA_22 HerA_C AAA_21 ABC_tran AAA_29 DUF87 FtsK_SpoIIIE TraG-D_C T2SSE
Other DBs
NCBI-ProteinID: BBD01474
UniProt: A0A2Z6AHX3
LinkDB
Position
1:2909318..2911783
AA seq 821 aa
MLNLAEYRRRSDRLADHLPWAALVAPGIILNKDGSFLRVLRFRGPDLESATEGELVSACA
RANNVLKRFGTGWALFFDAERREASAYSQSDFPDAASWLVDQERRATFLEEGEHYESRYH
LTLIWLPTPDSGEAAGRSLVERPDADKGRDWRGALASFVATSNRALDLFASFMPEVRALD
DSETLTFLHGTISPRPHIVAVPETPIYLDGLLADTPLTGGLEPRLGDTHVRTLTIMGFPN
MSRPGILDALNHQDFGYRWVTRFIALDKSDATKALTKLRRQWFNKRKSITALLREVMYNQ
PSQLLDSDADNKVVDADEALQVLGGDHIAFGYLTTTITVTDTDRGRVEDKVRQVERIVNG
LGFTTIREGVNAVEAWLSSLPGQTYANVRQPLVHTLNLAHLMPLSSVWAGPSRNTHLDGP
PLLYASTAGSTPFRLSTHVGDVGHMLVVGPTGAGKSVLLALIALQFRRYAGSQIYIFDKG
FSARAAVLAMGGAHHALGLGADAGETLAFQPLRRIDGPTERSWAAEWIAALLTHEKVVVT
PEVKDAIWSALGSLASAPPEERTLTGLTLLLQSNALRTALGAYTLDGPYGRLLDAAEQHL
AFSDVQCFETEALMNQAGVVAPVLTYLFHRLEKRFDGRPTLLVLDEAWIFLDHPLFAARI
REWLKVLRKKNVSVLFATQSLADIASSSIAPAIIESCPQRILLPNDRAIEPQGREAYEQF
GLNDRQIELISQATPRRQYYLQSARGNRLFELGLGPIALAICGASDPATQARIDAIIADG
GLTDFAARLLVDKNLNWAADLLARFEPATNINPANLLHNLA
NT seq 2466 nt   +upstreamnt  +downstreamnt
gtgctgaacctcgctgaatatcgtcgccgctccgaccggcttgcggatcatcttccctgg
gccgcgcttgtcgcgcctggcatcatcctcaacaaggacggcagtttcctgcgcgtgctg
cggtttcgcggtcccgaccttgaatccgcgaccgagggtgaactggtgtccgcctgtgca
cgggccaacaatgtgctgaagcgcttcggcaccggctgggcactgttcttcgatgccgaa
cggcgcgaggccagtgcctattcgcaaagcgatttccccgacgcggcctcctggctggtc
gatcaggaacggcgcgccacctttcttgaggaaggcgagcattatgaaagccgctaccat
ctgaccctgatctggctgcccacgcctgacagtggcgaggccgccggtcggtcactggtc
gagcggcccgatgccgacaagggccgcgactggcgcggcgcgctggccagctttgtggca
acgagcaaccgcgcactggacctgttcgccagcttcatgccggaagtccgtgcgctcgac
gacagcgagacgttgacctttctgcacggaacgatctccccgcgcccacacatcgtcgcc
gtgccggagaccccgatctatctcgatggcctgctcgccgacacgccgctgaccggtggg
ctggagccgcgtcttggcgacactcatgtccgcaccctcaccataatgggctttccgaac
atgagccggcccggcatcctggatgcgctcaaccatcaggatttcggctatcgctgggtc
acacggttcatcgcacttgacaagagcgacgctaccaaagcgctgacaaagctgcgccgc
caatggttcaacaaacgcaagtcgatcaccgcgctgctgcgcgaagtgatgtataaccag
ccatcacagcttctcgacagcgacgccgacaacaaggtggtcgatgccgacgaagcgcta
caggtgctgggcggcgatcatatcgccttcggctatctcaccacgacgatcaccgttacc
gataccgaccgtggccgcgtggaggacaaggtccggcaggtcgagcggatcgtcaacggg
ctcggcttcaccaccatccgcgaaggcgtgaacgccgtggaagcctggctgtcgtcactg
cccggccagacctatgctaatgtccggcagcctttagtccatacgctgaacctcgcgcac
ctcatgcccttgtcgtcggtatgggcaggccctagccgcaatacccatctcgatggcccg
ccgctgttatacgccagcacggcgggatcgacgccgtttcgcctctccacccatgttggc
gatgtcgggcatatgctggttgtcggcccgaccggtgccggcaaatcggtgctgctcgcc
ctgatcgcgctccagttccggcgctatgcaggcagtcagatctatatcttcgacaaggga
ttctcggcgcgcgcggccgtgcttgcgatgggcggcgcgcatcatgctcttggtcttggt
gccgatgccggtgagacgctggcgttccagccgctgcgccggatcgacggcccgaccgaa
cggagttgggccgcggagtggatcgccgccctgctgacccatgaaaaggtcgtcgtaacg
cccgaggtcaaggatgccatctggtcagcgctcggcagccttgcatccgcgccgcctgaa
gaacgaacactgacaggccttacgcttctgctccagtcaaatgccctgcgcaccgcgctc
ggcgcctatacgcttgatggaccatatggccggttgctcgatgccgccgaacagcatctc
gccttctcagacgtgcagtgcttcgagacagaagcgctgatgaatcaggctggcgttgtc
gcgccggtgctgacctatctcttccacaggctggaaaaacggttcgacgggcggccgact
ctgctggtgctcgatgaggcctggatctttctcgaccatccgctgtttgcggcacgcatc
cgcgaatggctgaaggtactccgcaaaaagaatgtttcggtgctgttcgcgacccagagc
cttgccgacatcgcatcaagcagcattgcgcccgcgatcatcgaaagctgtccgcagcgc
atcctgctgcccaacgaccgggcgatcgaaccgcaaggccgggaggcctatgaacagttc
ggcctgaacgaccgccagattgaactgatcagtcaggccactcccaggcggcaatattat
ctgcaatcggcgcgcggcaatcgcctgttcgaactgggcctcggcccgatcgcgcttgcg
atttgcggcgcgtccgatcccgccacgcaggcccggatcgacgcaattattgctgatggc
ggcctgaccgacttcgcggcccgacttctggttgacaagaacctgaattgggcggctgac
ctgctcgcacgcttcgaacccgcgaccaacatcaaccccgccaatctcctgcacaatcta
gcgtga

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