Sphingobium sp. YG1: YGS_C1P3054
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Entry
YGS_C1P3054 CDS
T05858
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spyg01002
]
YGS_C1P3054
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spyg01011
]
YGS_C1P3054
Peptidases and inhibitors [BR:
spyg01002
]
Cysteine peptidases
Family C82
YGS_C1P3054
Peptidoglycan biosynthesis and degradation proteins [BR:
spyg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
YGS_C1P3054
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
Motif
Other DBs
NCBI-ProteinID:
BBD01799
UniProt:
A0A2Z6AIN8
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All DBs
Position
1:complement(3262453..3263886)
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AA seq
477 aa
AA seq
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MIRFPLLAIAGFTALPIAAQTPPPVVAPTLPVPTVQSIPAPPPPVPIPALSPTQEAWAND
WLKSGAAQGLMARQKASGALKGDALVNALLDRAKALSTGRVDTADFLNIWALRPAAFDPR
PGLAKAVGEDRLAQWSAGLTPPWAGYDTLRKGLAKYEAIRDKGGWPTLTAGTSPDVVRAR
IALEDPAVTQDEKLVDVIQRAQRRYGLEPTGSLGARTLEALNVGVDDRIAAIMANMERWR
WMPRSLPVNRVQVNIAAAVLTVFEGDQPVSSMRAVTGSPDNQTPMLTSSIHSIVVNPPWN
VPMSIAKRELFPKGRATLAKQGYKIVKTPEGGERIVQPAGPGSALGRLKFDFNNPFAVYL
HDTPSRGKFSSYDRLASHGCIRLEKPVALAEQMVAADPNLNGQIQTLIDEGKTQRVSLPS
QVAVYLLYWTAFAGNNGTVSFRADPYGWDKLLAQKIEASSRRVDPTAAPSPAIASKD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtttcccgctgctggcaattgccggcttcaccgcactgccgatcgccgcgcag
acgccgccgcctgtcgtggcgccgactttgccggtgccgacggtgcagtccatccccgcg
cccccgccgccggtgccgattccggccttgtcgccgacgcaggaagcctgggccaatgac
tggctgaagagcggcgcggcgcaggggctgatggcccggcagaaggccagcggcgcgctg
aagggcgatgctctggtcaatgccttgctcgatcgggccaaggcgctgagcaccgggcgc
gtggatacggccgacttcctcaatatctgggcgcttcgccccgccgccttcgatccgcgt
ccgggcctggccaaggcggtgggcgaggatcgactggcgcaatggtccgccgggctgacg
ccgccctgggcaggctatgacacgctgcgcaagggcctcgccaaatatgaggcgatccgg
gacaagggcggctggccgacgctgaccgcaggtacgtctcccgatgtggtgcgcgcgcgc
atcgcgctggaagaccccgccgtcacgcaggacgagaagctggtcgatgtgatccagcgc
gcccagcgccgctatggcctcgaacccaccggttcgctcggcgcgcgtacgctggaagcg
ctcaatgtcggcgtggacgatcggatcgccgcgatcatggccaatatggagcgctggcgc
tggatgccgcgcagcctgccggtcaatcgcgtgcaggtgaacatcgccgccgccgtgctg
accgtgttcgagggcgaccagccggtcagttcgatgcgcgccgtcacaggcagcccggac
aatcagacgccgatgctgacgtccagcatccattcgatcgtcgtcaatccgccatggaac
gtgccgatgtcgatcgccaagcgggagctgttccccaagggccgcgcgactttggccaag
cagggttacaagatcgtcaagacgcccgaaggcggcgagcggatcgtgcagccggcgggg
ccgggcagcgcgctcggccggttgaagttcgacttcaacaatccctttgccgtgtatctg
cacgataccccgtcgcgcgggaaattttccagctatgatcggctggccagccatggctgc
atccgcctggaaaagcccgtcgcgctggccgagcagatggtcgcggccgacccgaacctg
aacggccagatccagacgttgatcgacgaaggcaagacgcagcgcgtgtcgctgcccagc
caggtcgcggtctatctgctctactggaccgcctttgccggcaataatggcacggtcagt
ttccgcgccgacccctatggctgggacaagctgctcgcgcagaagatcgaggcatcgagc
cgccgcgtcgatcccaccgccgccccctctcccgctatcgcatcgaaggactga
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