Sphingobium sp. YG1: YGS_C2P0191
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Entry
YGS_C2P0191 CDS
T05858
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K24073
RNA polymerase sigma factor CnrH
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spyg03021
]
YGS_C2P0191
Transcription machinery [BR:
spyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YGS_C2P0191
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
GerE
Motif
Other DBs
NCBI-ProteinID:
BBD02178
UniProt:
A0A2Z6AJD8
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All DBs
Position
2:241157..241726
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AA seq
189 aa
AA seq
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MSLDLKACSDGELAALTLGGRQAAFAEIMHRHQTPIFRLVRGLVVNADEALDLTQDCFVS
AFGHLQKYDGDRPLRAWLSRIAINKCRDWRRRQKVRRLFTFGAGPTEQEREAVPDDSPSA
HETVSGRMELARLNAAIAQLSAPLREVLLLRTVEGMTQAETAAALAISGKAVETRLYRAR
SRLAEILAD
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgagtctggatctcaaggcgtgttcggacggtgaactcgcggcgttgaccttgggtggt
cgccaggcggcgttcgccgagattatgcatcgccatcagacaccgattttccgtctggtt
cgcggtctcgtggtcaacgcggacgaggcgcttgatctgacgcaggattgctttgtctcc
gccttcggccatttgcagaaatatgatggcgatcgcccgctgcgcgcctggctgtcgcgc
atcgcgatcaacaaatgccgagattggcgtcgccggcagaaagtgcggcgattgttcact
ttcggagcgggtccaacagagcaggagcgcgaagcggtcccggacgatagcccctctgcc
catgaaacggtctcgggaaggatggagctcgcccgcctcaatgcggcgatcgcacagctt
tcggctccgttgcgcgaggtactcttgctgaggacggtagagggaatgacccaggcggaa
actgcggccgcgcttgcgatcagtggcaaggctgtcgagacgcgcctgtacagggctcga
agccggctcgcggaaatattggcggattga
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