Sphingobium sp. YG1: YGS_C2P0830
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Entry
YGS_C2P0830 CDS
T05858
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg03030
DNA replication
spyg03430
Mismatch repair
spyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YGS_C2P0830
03430 Mismatch repair
YGS_C2P0830
03440 Homologous recombination
YGS_C2P0830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spyg03032
]
YGS_C2P0830
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C2P0830
Enzymes [BR:
spyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YGS_C2P0830
DNA replication proteins [BR:
spyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YGS_C2P0830
DNA repair and recombination proteins [BR:
spyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YGS_C2P0830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
Motif
Other DBs
NCBI-ProteinID:
BBD02816
UniProt:
A0A2Z6ALS6
LinkDB
All DBs
Position
2:1004768..1005634
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AA seq
288 aa
AA seq
DB search
MFPPHPTDPGDDESKEPDFVVIDVETACARVSSICQIGIVGFRNGAVTFEYESLVDPRDH
FSSFNTRIHGIAARHVVGQPCFADVHAVVHSHLSGRTTVAHSYFDKGALAAACLVHDRAM
VETTWLDSVRVAKRVWPELPSHRLNIVAKHLGIPLKHHDALSDARAAGMIIVKAIDHTGS
QLTDWLAPPPRKRPPPLPRPATGGMLKGQRIAILGEPRDGPLAQRIAANGGKIMASVGAT
TTMLVVAADEPFGYVRYDAQFKRAEAYRASGSDIQIVSAASLLKALPL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgttcccaccccatccaaccgatcccggcgatgacgaaagcaaagagccggatttcgtg
gtcatcgatgtcgaaacggcatgcgcccgcgtcagtagcatctgccagatcggtatcgtc
gggttccgcaatggcgcagtcacctttgagtatgagtcgctggtcgacccgcgggatcat
ttcagcagcttcaacacgcgcattcacgggattgccgccaggcatgtcgtgggccaaccc
tgctttgccgatgtccatgccgtcgtgcacagtcatttgagtggtcgcacgaccgttgcc
cattcctatttcgataaaggggccctcgccgcagcctgcctggtccatgaccgcgcgatg
gtcgagacgacatggctcgatagtgtgcgcgttgccaagcgcgtatggcccgagcttccc
agtcaccggctcaacatcgtggcgaagcatctgggtatcccgctcaaacatcatgatgca
ctaagcgatgcccgcgcggcagggatgatcatcgtaaaggcgatcgaccatacaggctcg
caattgaccgactggctggcgccaccgcccagaaaacgtccgccgcctttgccaaggcca
gcgaccggagggatgctcaagggccagcgcattgccatccttggcgagccgcgtgacggt
ccactggcgcagcgcattgcggccaatggtgggaagatcatggcgtcagtcggcgcgacc
acgacgatgctggtcgtcgcggcagatgagccgttcggctatgtccgttacgatgcgcag
ttcaaaagggctgaggcatatcgagcgtcaggttccgatatccagatcgtgtcggcagcc
tctctgctcaaagcactgcccttgtaa
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