Sphingobium sp. YG1: YGS_C2P1165
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Entry
YGS_C2P1165 CDS
T05858
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00470
D-Amino acid metabolism
spyg01100
Metabolic pathways
spyg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YGS_C2P1165
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
YGS_C2P1165
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spyg01011
]
YGS_C2P1165
Enzymes [BR:
spyg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
YGS_C2P1165
Peptidoglycan biosynthesis and degradation proteins [BR:
spyg01011
]
Precursor biosynthesis
Racemase
YGS_C2P1165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
BBD03151
UniProt:
A0A2Z6AM46
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All DBs
Position
2:complement(1445909..1447024)
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AA seq
371 aa
AA seq
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MDYGTAGSLRIDLSALVANYRTIAAQVAPAAVAGVVKADAYGLGAVPVSHALLDAGCRHF
FVAHLGEAKALKPHLPADATLYILNGLRPGAEAECAAIGAVPVLNALVQLDAWAATARAS
GGTLPGVVQVDSGMSRLGLTPEELAILRAQPERLDGIDVQLVMTHLACADEPSSPVNADQ
RALFDQIAVQFPSVPRSIDNSGGAMAPDVRHGDIVRAGIALYGGAPHGPPNPMAAVVALD
AYIMQLRQVPAGAGVGYGLTHHCDRPTQVATISVGYADGWPRHVSGRGSAYIGGLRVPVI
GRVSMDSMALDVTDLPADLLYPGAPVELLGPHQRIDDVAAQAGTISYEILTRLGSRYDRT
YLPAILESIEP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggattatgggactgcgggcagcctgcgcatcgacctgagcgcgctggtggccaattac
cggacgatcgcggcgcaggtcgcgccggctgcggtggcgggcgtggtcaaggcggacgcc
tatggccttggcgcggtgcctgtgtcgcacgcgttgctggacgcagggtgccgtcatttc
ttcgtcgcccatctgggggaggcgaaggcgctcaaaccccatttgccggccgacgccacc
ctctatatcctgaatggcttacgccccggtgccgaggcggaatgtgccgcgatcggcgcg
gtgccggtgctcaacgcgctggtgcagctggacgcatgggccgccacggcacgcgcgtcg
ggcggcacgctgccgggcgtggtgcaggtggatagcggcatgtcgcgtctcggcctgacg
cccgaggaactggctatcctgcgagcacagcccgagcggctggacgggattgatgtccaa
ctggtaatgactcacctcgcctgtgcggatgagccgtccagcccggtcaatgccgaccag
cgtgcgctgttcgaccagattgcggtgcaatttcccagcgtgccgcgttccatcgacaat
tcgggcggggcgatggcgcccgacgtacggcatggcgacatcgtgcgcgccggcatcgcg
ctttatggcggcgcgccgcatgggccgcccaatccgatggcggccgtggtcgcgctcgac
gcttatatcatgcagttgcggcaggtgccggccggcgcgggcgtgggctatggcctgacc
catcattgcgatcgaccgacgcaggttgccaccatttcggtcggctatgccgatggctgg
ccacgccatgtcagcgggcgcgggagcgcttatatcggcggcctccgcgtccccgtcatc
ggccgggtgtcgatggatagcatggcgctcgatgtcacggacctgcccgccgacctgctc
tatcccggcgcgccggtcgaattgctcggcccgcaccagaggatcgacgatgtcgccgcg
caggccggcacgatcagctatgaaatattgacccgcctcggcagccgttacgaccggacc
tatctgcccgcgattctggagagcatcgagccatga
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