Sphingobium sp. YG1: YGS_C2P1337
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Entry
YGS_C2P1337 CDS
T05858
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C2P1337
Enzymes [BR:
spyg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
YGS_C2P1337
DNA repair and recombination proteins [BR:
spyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
YGS_C2P1337
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Peptidase_M11
Motif
Other DBs
NCBI-ProteinID:
BBD03323
UniProt:
A0A2Z6AMS5
LinkDB
All DBs
Position
2:complement(1654040..1655590)
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AA seq
516 aa
AA seq
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MTILIPLLGDQLSHGLAPLRDVDPSDAVVLLMEVGDEATYVRHHKRKIALIFSAMRHFAK
ELEAKGWRVEYMCIDDPGNSGSFTGEVKRAVERHRPSAIRIVEPGEWRVKTMIDGWSKTF
GLPVDVLVDDRFLCGILEFQTWAQARNDLVMEFFYRDMRRKTGLLMESDGQPTGGAWNFD
KENRAPPRCGLNYPEPMHFQPDQITEQVLALVEDRYGQHFGRLEKFSLPVTAGQARRALG
HFVRTALPDFGTYQDAMVTGQDWLYHSWLSPALNLGLLTPLEVAQAAADAYAAGDVPLNA
AEGFIRQIIGWREYVRGYYWLEMPEVGDANALAATRPLPAFYWTGDTDMLCLAEAIRNTR
DNAYAHHIQRLMVLGNFAMLAGIRPQDVADWFLIVYADAYEWVELPNVIGMSQHADGGRL
ATKPYAGGGAYINRMSDHCGGCRYDVKKKVGPDACPFNALYWDFLARHERRFRRNRRMVQ
IYANWDRMKPDVRDAYRASAADFLAKLEPAEEGWVR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctcattcctctcctcggcgaccaactcagccatggtctggcgccgttgcgc
gatgtcgatccatcggatgcggtggtgctcctgatggaggtaggggatgaagcaacctat
gtgcggcatcacaagcgcaagatcgccctgatattttcggccatgcgccacttcgccaaa
gaactcgaggccaagggctggcgcgtcgagtatatgtgcatcgacgatccgggcaacagc
gggagttttaccggagaggtcaagcgggctgtcgagcgtcatcggccgagcgcgatccgc
atcgtcgaacccggagaatggcgggtgaagacgatgatcgatggctggagcaaaacgttc
ggacttcccgtggatgtgctggtcgatgatcgcttcctctgcggcatattggagttccag
acctgggcgcaggcgcgcaacgacctcgtcatggaatttttctaccgggatatgcgccgc
aagaccggcctgctgatggagtccgatggacagccgacgggcggcgcatggaatttcgac
aaggagaaccgcgcaccacccaggtgcggcctgaactatccagaacccatgcactttcag
cccgatcagatcacggagcaggtgctggcgttggtagaggatcgttatggtcagcatttc
gggcggctggagaaattcagcctgcccgtgacggcggggcaggcgcgcagggcgctcgga
catttcgttcggacggcattgcctgatttcggcacctatcaggatgccatggtgacagga
caggactggctctaccatagctggctcagcccggcgctgaacctcggcctcctgacgccg
ctggaggtcgcgcaggcggcagccgatgcttatgcggctggcgacgtgcccttaaatgca
gcggagggattcatccgccagatcataggctggcgcgaatatgtccgcggctattactgg
ctcgagatgccggaagtgggagatgccaacgctcttgcggcaacgcgaccgctgccggca
ttctactggaccggcgataccgacatgctctgcctggcagaggcgatccgcaatacgcga
gacaatgcctatgcgcatcatatccagcgtctgatggtgctgggcaatttcgccatgctg
gcgggcattcgccctcaggatgtcgcggattggttcctgatcgtctatgcggacgcatat
gaatgggtcgaactgcccaatgtcatcgggatgagccagcatgccgatggcggacgcctc
gcgacgaagccttatgcgggcggtggcgcttatatcaatcgtatgtccgaccattgcggt
gggtgccgttatgacgtgaagaagaaagtcgggccggatgcctgcccgttcaacgcgctt
tattgggattttctcgcgcggcacgaacgccgcttccgtcggaatcgcagaatggttcag
atatacgccaattgggatcggatgaagcccgatgtccgcgatgcctatcgcgcaagtgcg
gccgattttctggcgaagctggagcctgcggaagaaggctgggtccgatag
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